| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4394 |
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| Symbol | |
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| ID | 4685358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 311264 |
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| End bp | 313021 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639826249 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_973414 |
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| Protein GI | 121582972 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.483682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCAC GTCATTCCTA CATGCACAAC GGAACCGAAG TTGCATTCGA CTTCGTGGAT
CACATCGACC ACTGGCTGGA GTACCTGACA GAACTTTTAA GCACTGCCGA CAGCAAATCC
AAGCCCAAGG TCGAGCGCCA GATCCGCTAT CTGCTGGAGT TCCGCGCCGG CACGAACTGC
AACATCAACC ACAACCGCCT GCTGCTGTAC TACTACAGCC ACCGCGCCAA GAAGGCGGGC
AACGACATCT CTTTGCCTGG AGAAGATCTG TCCGGTGACA ATATCAGCAT GACGAAAGGC
AATGGCGATG CCCAGGCCAA GATCGACGCT TTCATTGCTG AGTTTCGGAC TCGCGAAGGT
TCGACCTCCA TGTCGATCCA CCCAAGCAAG CCCATCCAAA GCGAGTACGA GCCCACCGAT
CCAGCCTTCA AGCTGATCCT CAAGGCTTTG GCCAGCGAAG ATATGTTCTT CATACAGGGC
CCACCGGGCA CCGGCAAGAC AACGGCTATC GTCGAGATTA TCCTGCAGGT GCTCAAGTCC
AAGCCCAATG CCCGCATTCT GGTGTGCTCT GAAACGCACG TGGCCGTGGA CAACGCGCTA
GACCGACTGG CCAAGCAGTC GCGCCCCGAG CTGATGGACT CGATCCTGCG CTACCCTGGC
TTCGCCATCA CGGAGTTTGA GTGCGACAGA ACGCCCGAGG CAGACGCTAT ATCGCGAGCA
GAGGCTATCT GGCAAAAGGC CTATGGCGCG GCACCAGAGC TGACCAAGGA TCTATGGGAA
ACATTGGAGG CATCCAAGAC CCATGACGAC GACATCAAGG TATCGCGCTG GCAAGGCCGC
AACCTGGCAG ACATGCACCA GGTGGTAGGG GTGACCTGCA ACCAGATCGA CCATTTGATC
GACAGCGACA CCCAGATGTA CGACCTGGCG ATCGTGGACG AATGCTCCAA GGCCACTATG
CCCGAATGGC TCATGGCCAT GTGCGTAGCC AAGAAATGCG TGCTGGTCGG TGACCACAAG
CAGCTGCCAC CTACGTTCTG TTCGGAAGAA GCCGAAGTGC TGGAACAGAT GGACGAGCGC
AAGGAACGCC TGATCCGTAA TGGTGTGATC GAGCGCCTGT TCGAGAACCT GCCTACCGAG
CTGAAAGGCA CGCTGGGCAA GCAGTTCCGC ATGCTGCCGC ACATTGGGCA CTTCATCTCC
ACCCACTTTT ACAACGGGCA ACTGGAGCAC CACCGCACGA CGACAACCCA CGAATTTCAG
GACTTTGGCT GGTTTACGTA CAAGTCCGGC GGCATGCGCG TGCCTGAGCA GCAGGGCCAA
GAAAAGAAGA TATTAATCAA CAATCTGGAG CTCAAGATCA TCATGGCTCG ACTGGCCGAG
ATCCGCGTCC GTCTCAAGCA AGCCAAAACC AAGCGCAAGG TCAGCGTTGC GGTGATCACC
CCGTACCGCG CCCAGTGCAA GGCATTGAAA ACTGCGCTCG CAAAGTACGA CTTCAGCGAC
CAACTGGCCG TGGAAGTCGA CACCGTGGAC GCGTTCCAAG GACGCCAAGC CGACATCGTT
TTTTTCTCGT TCGTGAGAAA TACCGGGCCC GCAACGTTCT ACGCTGACGA CCGCCGTATA
AACGTGGCCA TTTCCCGTGC ACGTGATGCC GTCTACTTAG TGGGCGACAT CGACTACATA
CGCAGTAAGC GTCTGCCAGT GCTCGATGCA CTGGCCAAGC TTGACGTGCT GATCTTGCAT
CGCAAGGAAG ATGTCTGA
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| Protein sequence | MGARHSYMHN GTEVAFDFVD HIDHWLEYLT ELLSTADSKS KPKVERQIRY LLEFRAGTNC
NINHNRLLLY YYSHRAKKAG NDISLPGEDL SGDNISMTKG NGDAQAKIDA FIAEFRTREG
STSMSIHPSK PIQSEYEPTD PAFKLILKAL ASEDMFFIQG PPGTGKTTAI VEIILQVLKS
KPNARILVCS ETHVAVDNAL DRLAKQSRPE LMDSILRYPG FAITEFECDR TPEADAISRA
EAIWQKAYGA APELTKDLWE TLEASKTHDD DIKVSRWQGR NLADMHQVVG VTCNQIDHLI
DSDTQMYDLA IVDECSKATM PEWLMAMCVA KKCVLVGDHK QLPPTFCSEE AEVLEQMDER
KERLIRNGVI ERLFENLPTE LKGTLGKQFR MLPHIGHFIS THFYNGQLEH HRTTTTHEFQ
DFGWFTYKSG GMRVPEQQGQ EKKILINNLE LKIIMARLAE IRVRLKQAKT KRKVSVAVIT
PYRAQCKALK TALAKYDFSD QLAVEVDTVD AFQGRQADIV FFSFVRNTGP ATFYADDRRI
NVAISRARDA VYLVGDIDYI RSKRLPVLDA LAKLDVLILH RKEDV
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