| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4384 |
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| Symbol | |
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| ID | 4685287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 292514 |
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| End bp | 296014 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826239 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_973404 |
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| Protein GI | 121582962 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0169007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.744052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA CACTCGAAGA ACTGCAGGCG AACATTGAAG CCGCCGTCAC GCCAGGATAT
CGGCAAAAAT TGCTGGCACG AGGCCAGGCC CGGGGAATGA TTTGGCGAGC TGGGCTACTG
CCTATCGACG CTCCCCACTT CAGCCCGGAA CTATCCGAGG ACCTGCTGTC TTTTGGGTAC
TCGCTGCTGT TGCATGGGCT GAGATATGTA GACCTAGGAG GCAATTTTTC TCTCGCAAGA
GTGGCGTTTG AAGTAGCCGC TGAGTCAATT GAGGCGGTGG TAGCACGCGG TGAGGTGAAC
GAAAATCGTG ACTTTCACCG ACTGATAGCG GGCGCGGCCT ATCACCTTGG CCATTACTCG
GCACGCGCCT ACTCGATGCT TTTTGAAGGG CTGGGTCAGT CGAACCTGTC CGTTGTCGAG
CGCTGCTTGG CCCAACTTAT GTTGCGAGAC CTTGAAGGAG TCAATGTTGC GGTGTCGAAC
TGGGTCGAAT CTGGTGTGGG TTCGGACAGC AATCTCATCG AGGCATTTGA TACGGGTATC
GACGCAGAAG TCGAGGATGA GGACGCGGGG GAGAGCGGAG TAATCGAGGC AATGACGCTG
GCATTGGAAG GTAATTTCCT ATCAGCAATG TCCCAGACAT TGCTCGCCTT GGAGCGAGGG
GAGCACTCTC TGATTTTACA AGCCCAGGCA CGGTTGGAAG AGGGCCTGTC CGTTGCAGGA
GAATTGAACC TGGTCACTCA ATGGTGGGCT CACCGGCTTG CGATTCATAT CGTTGGCGGG
CTTTGGGCTA ATAGCTTCCA TTCGCTCCTA CCGAGTCAAG GGCCAGCTGG CGCAGACGTG
GGCGATTGGG TCCACCTACG CAAGCTGCTT ATTGCGTCGC TAATGCGCCG TCGTCGGGCA
GAGATTGAAC TCTGGCCATC CCAGATTGAT GCGGCGAAGC GTGTGCTCGA ATTTGAAGCC
AATCTGGTGC TTTCCCTGCC AACTAGCGCG GGAAAGACGC GCATTGCGGA GTTGTGCATC
TTGGCCTGCC TTGCACGTGG AAAACGGGTG GTCTTTGTGA CTCCGCTTCG GGCGCTGTCG
GCGCAGACCG AGGTGTCGCT ACGGCGGACT TTCGGACCGT TGGGTAAGAC GGTGTCGAGT
CTCTATGGCA GCATTGGCAC GAGCTCGAGT GATGTGGATG CACTCAAGTC CCTGGACATA
GTGGTTTCCA CCCCCGAAAA GCTGGACTTC GCACTTCGAA GCGACCCTCA ACTCCTGGAT
GACATCGGAC TTGTTGTCTT AGACGAGGGC CATATGATTG GTCTGGGTGA ACGTGAGGTC
CGATATGAGG CACAGATTCA ACGCCTTCTG CGGCGTGCTG ATGCTGCCAG CAGGCGGATT
ATTTGTCTCT CGGCTATTTT GCCGGATGGC GACCAGCTAA TAGATTTCAC AGCGTGGCTC
ACGTCCGACC GTGAAAATGG ACTCATTAAG AACGACTGGC GTCCTACTCG TTTGCGATTT
GGGGAGGTTG ACTGGAATCC AGTCAGTAAG CTGGCGCAAC TCAAAATCGT GGTCGGGGAT
GAGCATCCTT TCGTTTCGAA ATTTGTTGTC GGTAAAACCT TGAATGCTAA TAAGAATGCA
AAAGTCTACC CGGCGTCACA GACCGATTTG TGTATTCTTA GTGCTTGGAG ATTGATTGAG
GAGGGCCAGT CGGTCTTGGT CTTCTGTCCC CTCAGGGTGT CGGTCGTGCC CTTCGCGAAA
CGGATTATCG AGATGATTCA GCAAGGGCTA ATCGTACCGA TGCTGACCCC GCCTGCAGAA
GTCCTGGCCT CAGCCCTGGC AGTCGGTGTC GAGTGGTTCG GACCGGACCA CGAAATTCTC
AAGTGCCTGC GCATGGGGGT TGCTGTACAT CACGGGGAAC TGCCGGCCTC ATTCAGAAAA
GAGGTAGAGC GTCTACTGCG AGACGGAGTG CTGAAGCTTA CGGTTTCCTC GCCGACCCTT
GCACAAGGAT TGAACCTTGC TGCAACGAGT TTGGTGTTTC ACGGTCACGC TCGAAAAGGC
GCCCCCATTG ACGTCTCTGA GTTTCGGAAT GTCGTGGGTC GTGCTGGGCG CGCATACATC
GACATTGAGG GGCTGGTGCT GTATCCCATG TTCGATAAAC ATGAAAAACG TCGAACTGCA
TGGGCAAATC TAATAGCGAG TACGAAGGGC CGAGAGATGG AAAGCGGCAT TTTGCAACTA
CTCTACTCAC TTCTCGTTCG AATAGCGAGA AAACTGGATG CTCCTGACGT GAGTACTGTG
CTTGACTACG TTGCAGGCCA GGGGGGCTGG GATTTTCCGT TTCTGCGGTC CGAAACCGGC
TGGCGAGCAG CCAATGCGGC TGAGGAGTGG CCGCGCCACC TGACGAGTCT CGATACAGCT
ATCTTTAGCT TGCTCGGTGA CGCGCAAGTC CCGGACGAAG AAATTGAGGC GACGCTGGAC
GAAGTGCTGA CATCCTCGCT TTTCATGCGA CGAATGGCGC GTCGAGACGG CCTAATACAA
AATCTCTTGA TTGGTGGCTT GAAAGCACGC GTGAATTTCA TCTGGTCCAA TTCCTCCGCC
TTGCAACGTC GCGGTTACTT CCTTGCAGGC TTAGGCCTAG CCTCCGGCCA AGCACTCGAT
AGCAAGGCGA AAGAACTTGA GTCTCTACTA CTGCAAGCGA ACGTGGCCGT GGGCGAAGGA
GAGGTCGAAA TGGCAATTCA GGCCATCATC GGCTTTGCAC ACATCGCTTT CGAAATTCCG
CCCTTTGCCC CGAATGGACT ACCTGGGAAC TGGAAATACA TATTGGAGCT GTGGCTTCGA
GGGGTGCCAG TGCCGCACAT CGGCAGCAAT GACCCGGATG GTACGGTCTC CTTGATTGAA
GGCGCCTTTG TCTATAACCT TCCGTGGGCC ATGGAGGCCG TGCGGGTGAG GGCAGAGGCG
CATCTGGACC TTTTCTCAAA CGATGTTAGC GTCGCCAACT ACGGCCGTGC ACATGCAGTG
GCAGCGATAG AAACTGGAAC TCTATCGGTA GCTGCATCCA CACTCATCAA AGCTGGTTTT
GCATCCAGAC TAGGCGCCAT CCATGCAGTC ACTGTCACGG CTGCTGATTT CGATTCATCG
GCTGGGATGA GGGCTTGGCT TTTGTCCGCA GAAGTAAAAG CGCGACGAGA TAACCCTAGT
TGGCCCACGG TGGAATCACA TGAGCTATGG GTCGACTTCA CCGCACCTCA TGGTAGCGGA
TACACGAAGC CTTGGTTAGC GACCGCATAC ACGGGTCCTG TTACTTGGCA CGGTTTGCCC
ATGCCGCCAG GCACCCCGCT GAGACTGGGC GGCGGACCAG GCAAGGAGAA TGCGATTTAC
ACCGCGGACT TCAAGGAGGT CGGCAAGATA GGCTATGCGT TTAATCAGGC CGCTGTTGGC
CTGTCCATTG CGACAGCCAC GGGAGCTGCA AATGAGATTG CCTTTGAGTA CATCGGTCCG
AACGACTTGG TTGTTCTGTA G
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| Protein sequence | MATTLEELQA NIEAAVTPGY RQKLLARGQA RGMIWRAGLL PIDAPHFSPE LSEDLLSFGY
SLLLHGLRYV DLGGNFSLAR VAFEVAAESI EAVVARGEVN ENRDFHRLIA GAAYHLGHYS
ARAYSMLFEG LGQSNLSVVE RCLAQLMLRD LEGVNVAVSN WVESGVGSDS NLIEAFDTGI
DAEVEDEDAG ESGVIEAMTL ALEGNFLSAM SQTLLALERG EHSLILQAQA RLEEGLSVAG
ELNLVTQWWA HRLAIHIVGG LWANSFHSLL PSQGPAGADV GDWVHLRKLL IASLMRRRRA
EIELWPSQID AAKRVLEFEA NLVLSLPTSA GKTRIAELCI LACLARGKRV VFVTPLRALS
AQTEVSLRRT FGPLGKTVSS LYGSIGTSSS DVDALKSLDI VVSTPEKLDF ALRSDPQLLD
DIGLVVLDEG HMIGLGEREV RYEAQIQRLL RRADAASRRI ICLSAILPDG DQLIDFTAWL
TSDRENGLIK NDWRPTRLRF GEVDWNPVSK LAQLKIVVGD EHPFVSKFVV GKTLNANKNA
KVYPASQTDL CILSAWRLIE EGQSVLVFCP LRVSVVPFAK RIIEMIQQGL IVPMLTPPAE
VLASALAVGV EWFGPDHEIL KCLRMGVAVH HGELPASFRK EVERLLRDGV LKLTVSSPTL
AQGLNLAATS LVFHGHARKG APIDVSEFRN VVGRAGRAYI DIEGLVLYPM FDKHEKRRTA
WANLIASTKG REMESGILQL LYSLLVRIAR KLDAPDVSTV LDYVAGQGGW DFPFLRSETG
WRAANAAEEW PRHLTSLDTA IFSLLGDAQV PDEEIEATLD EVLTSSLFMR RMARRDGLIQ
NLLIGGLKAR VNFIWSNSSA LQRRGYFLAG LGLASGQALD SKAKELESLL LQANVAVGEG
EVEMAIQAII GFAHIAFEIP PFAPNGLPGN WKYILELWLR GVPVPHIGSN DPDGTVSLIE
GAFVYNLPWA MEAVRVRAEA HLDLFSNDVS VANYGRAHAV AAIETGTLSV AASTLIKAGF
ASRLGAIHAV TVTAADFDSS AGMRAWLLSA EVKARRDNPS WPTVESHELW VDFTAPHGSG
YTKPWLATAY TGPVTWHGLP MPPGTPLRLG GGPGKENAIY TADFKEVGKI GYAFNQAAVG
LSIATATGAA NEIAFEYIGP NDLVVL
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