| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4382 |
|---|
| Symbol | |
|---|
| ID | 4685292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | + |
|---|
| Start bp | 290219 |
|---|
| End bp | 291574 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639826237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973402 |
|---|
| Protein GI | 121582960 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.581951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.498692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT GTGAGCACCT GCGGCAGCTT CTGCGTCCTG TGGTGGGAGA TATGAAGGAC
GCTTGCACCA ATAGCACGAT GCCGGAGCTA TGCATTGCGA TGGGCTTACC CGTGCCGCCT
GAGGGCGGCG ACAAGCGTGG CCGGCTGCAT GCCGCGTTCG ATGCTCTTCC TGACCCTGAC
ATACCAGCTT TTGCCCAGAG ATTAGTCGAC CAACGCAGCG TCCGCGGCGA GTTGCGCGAC
CATGTGCAAG ATGCTCTTTG GGCTCATCTG CCAGTCATAG ATATCCCAAA GCGAAGCCGT
CGAGACATTG CACGTGCGCT GAACCAAATA GAGTTGTTCG CGCACTGGGA CCATTTTGCG
CAAGCCCTGA AAGATGTATT CATCCTTCAG GAATACAGCT TTGCTGGTCT GAGTGATGGT
GTTTTGGAGT TTGCACATCG ACACTTTGTG CGAAATCCGG AAGACGCAGA CGTCGAACTT
TTGTTCGAGA AGCTGCGGGC ATTCGACCTA CCGAACAGGA GATTCGTCCT GCTGCTAGAA
AAGTTCGCAT CAGCGGACGT GCAGGTTGAC GCAGACGCTC AAGAACGCCT CGTTAAGCTT
GTGAATCCTA TGTTGCAGGC TGCTGGAGCC GAGCTCCGGC AAACCTCGAC CGACGGTGGG
TACCCGATAT TTACCGTTGT GTCCATCAGG TCACCGCGAG GGCGGCCGAA GAACCTCATC
TTTGCGTCAT CGACAAAGCC TGATATCCGA CTCAGTGACG CCATCAACAA TGACATCGAG
ATTGCGTCGA ACCCAGGCGC GGTCTTGGTC TATGACCGTC CTCTAGGCGC AGACGGTTTG
CGGTGGAGCG AGCTTCAGCG CTGGTGGAGT GAAACCACTG GCGAACCGGA TGTCCAGAAG
GCTCGGCAAA CCTTGCTTCG GCGACTACAA CAGTGCCTTC CCGACTCGTC GCCGCCACAA
CGGCTGCTCT TCAGAACGTT TTTCATGACC TTTGGCGAGT CCGTCCCTCG ACTGCCGGCA
CTGCTGCCAG AGGTTTGGCT TCATTGGGAC CCGAAGACGG TGGCTAGTCG AGGAGCTGCT
GCGCTGCTGA CCCACCGCAT GGACTTTCTC ATGCTCTTGC CTGGGGGCGC AAGGGTGGTG
CTCGAAGTAG ATGGCGCGCA GCATTACGCA GACGAATCGG GTCGTGCGGC CCCTCAAACA
TACGCGCGAA TGGCTAAGGG AGACCGAGAG CTAAGGCTTG CAGGATACGA AGTATATCGG
TTCGGTGGAG CAGAACTGCA AGGACCCGAA CCTTCTCTGC TCGCTGCTGA ATTTTTCCGG
GCGCTGTTTC AGCGACACGG AATTCCCCTC ACCTGA
|
|---|
| Protein sequence | MNTCEHLRQL LRPVVGDMKD ACTNSTMPEL CIAMGLPVPP EGGDKRGRLH AAFDALPDPD
IPAFAQRLVD QRSVRGELRD HVQDALWAHL PVIDIPKRSR RDIARALNQI ELFAHWDHFA
QALKDVFILQ EYSFAGLSDG VLEFAHRHFV RNPEDADVEL LFEKLRAFDL PNRRFVLLLE
KFASADVQVD ADAQERLVKL VNPMLQAAGA ELRQTSTDGG YPIFTVVSIR SPRGRPKNLI
FASSTKPDIR LSDAINNDIE IASNPGAVLV YDRPLGADGL RWSELQRWWS ETTGEPDVQK
ARQTLLRRLQ QCLPDSSPPQ RLLFRTFFMT FGESVPRLPA LLPEVWLHWD PKTVASRGAA
ALLTHRMDFL MLLPGGARVV LEVDGAQHYA DESGRAAPQT YARMAKGDRE LRLAGYEVYR
FGGAELQGPE PSLLAAEFFR ALFQRHGIPL T
|
|---|
| |