| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4375 |
|---|
| Symbol | |
|---|
| ID | 4685295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | - |
|---|
| Start bp | 281934 |
|---|
| End bp | 282941 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639826230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973395 |
|---|
| Protein GI | 121582953 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0453814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAG ATGAGTGGCT GACGAAAAAC AAGTCAAACT TTGGCAGCGA TTATGAAATC
CTGTTTGCAG AGACGGTATT GCCTCTGATC CCTGAACTCA GCTTTGATGC AGTTTCGGTG
CAGTATCCAT TTCAGGACGG GGACAGACGA CAGCGCTACT GCGATTTTGT CATCCATGAA
AATGAGGATG TTCGAATCGC AATCGAGATC GACGGCTATG ACAAGCGCGG TATGGGTACG
GGGATGTCCC ATGCAGATTT TGTTGACTGG CAGCGCCGAC AAGCGGCACT GACCTCACAA
GGCTGGTATG TGCTGCGCTT TGCTAACAGA GATGTCAGGG ACGAACCGAA CCGATGTGCA
GAACATATCA GCCTGCTGCT CAAGCGTTCA CAAAGCAAAT CCCAACGCAA GACATTAAGT
GCCAAGGAAA AGGAGCGACT GGACGCACTG ACCAAAGGCC AAAACGACAA AATCGAATAC
CTCAATAAAG AGACATCCGT CATGAAATAT ACCGTCGCGT CATTTACTGC CCTCATCCTC
ATGCTCGTGA TGGTGATCGT CTGGCAGAGT CGCGGGGGTT CATCCGGCCA GTCTCAGGCA
ACAGTGCAAA GCGCTACCAC CCCACTCCAG CCTGTAATGC TTTCTGCTTT ACCGGCTACT
GAGGTGCCCG TGCAGGTTCC TGAAGGTGCA ACCTGCGACA ACCCTATCAG TTGGCAACAG
GCTGGGCAGC ATATTGGTCA GACTGCAGCG GTAGTCGGTC CTTTGATGAA AGTAACTCAT
CGCGAGAATT CACGCGGCAA TCCCACATGG GTTGATGTAG GCGCGGTCTA TCCCAATGTC
CAGCGGCTGG TACTGGTAAT CTGGGGTAAA CAAAAACCAG ACTTCCCAAT GGTAAGGCCG
GGACAGTTAG AAGGGAGAAG TGTCTGCATC ATTGGGCAAA TCGAAAGCTA CAAAGGCATT
CCTCAGATCG AACTGAAAAC CGCGAGTCAA CTCAAGATAT TGCGGTAG
|
|---|
| Protein sequence | MNLDEWLTKN KSNFGSDYEI LFAETVLPLI PELSFDAVSV QYPFQDGDRR QRYCDFVIHE
NEDVRIAIEI DGYDKRGMGT GMSHADFVDW QRRQAALTSQ GWYVLRFANR DVRDEPNRCA
EHISLLLKRS QSKSQRKTLS AKEKERLDAL TKGQNDKIEY LNKETSVMKY TVASFTALIL
MLVMVIVWQS RGGSSGQSQA TVQSATTPLQ PVMLSALPAT EVPVQVPEGA TCDNPISWQQ
AGQHIGQTAA VVGPLMKVTH RENSRGNPTW VDVGAVYPNV QRLVLVIWGK QKPDFPMVRP
GQLEGRSVCI IGQIESYKGI PQIELKTASQ LKILR
|
|---|
| |