Gene Pnap_4373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4373 
Symbol 
ID4685478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp280602 
End bp280955 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID639826228 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_973393 
Protein GI121582951 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000971862 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGCCT GCCTGGCGCT GCCGGCCTGG GCCGCCCCTA CCGAATGCCC CGAACACTTC 
GCCGGCGGCG TCCCGCCCGC GCTCACCAAT GCCAGGCTGC AATCGCGCAC GCAGGCCCTT
TGCTTTCAGA GCTACGCCGC GCTGCACTCA GGCATCAGCC GCACCCCGGT CTACTCAGCC
GAGCACCTGA CCCGCGCCAA TATAGAAGCG GCCAAGAAGC TCTCGCGGCG CGACTCGTTC
CATGCGGAAA GCCAGCTGGC GCAAGAAGAC CGGGCCGAAC TGAGCGACTA TGCCCGCTCT
GGCTATGACC GAGGCCACAT GCAATACCCG GTAAAAAATA TACTCATCAG CTAG
 
Protein sequence
MAACLALPAW AAPTECPEHF AGGVPPALTN ARLQSRTQAL CFQSYAALHS GISRTPVYSA 
EHLTRANIEA AKKLSRRDSF HAESQLAQED RAELSDYARS GYDRGHMQYP VKNILIS