Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4349 |
Symbol | |
ID | 4685373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 259676 |
End bp | 260965 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639826208 |
Product | phage integrase family protein |
Protein accession | YP_973373 |
Protein GI | 121582931 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGTCG TACAAAGCGG CGCCATAGGC AGCCTGATCA AGAGCGCCGA CGCCATCGTC GAGCGGCACG GCGCAGTGCG TGTCAACGGC AAGGTCGCCT CCATCAGGAC CATCGAGATT TCCCGGCAGG TGATGCGCGA GTCTTGCCAC AGATTGCATG GCCTGGGCTT TTACCTGAGC GATATATCTT CGCTGAAGGA AAAGCACATC CATGCCCTGG TGCGCGACTG GCATGCCACG GGCAGCCGGA GCGGCAAGCC GCTGGCAAAC AAGACGATGC AGAACCAGCT GTCGCGCCTG CGCATCTTTG CCGGCTGGCT GGGCAAGCCC GAGATCGTCA AGCCCGGCGG GCTGGCGGTG TACCTGCCCG AGGTCGAGGC ATCGAGCCTG AAGGTCAGGA CCTATACCGA ACGCAGCAAG AGCTGGACGG GCAATGGGGT GGACCTGGTC GAGATCATCG GCCGGGCGAG GCTCGAAGAC GAGCGTGTCT GGGCCATGCT GCTGATGGGC GTGGCGTTCG GCCTGCGCAA AAAGGAGATG CTTCGGATTC AACCCTGGCG GGCCGACGCG CTCTGCGAGC TGCGCATCGA TGGCAGCGTG GCCAAGAACG GCCGCGCCCG CTCGATTCCC TTCATCGGCG CGGGACACCC TTATGGGCTG TTTCAGCGCT GGTGCCTGGA CCAGGCCAGG CGCGTGACCA AGCGAGGCCA GACGCTGGGC TGGCCGGACT TGAGCTTCAA GCAGTCGGAG AACCGCTTCT ACCACTGCAT GAAAAAGCTG GGCGTCACCC AGGTCGACAG CGGCATCTCG CCGCACGGCC TGCGGGCGGA GTTCGCCGAG AACATGGCCC TGATCCGGGG CTTGGTGCCG CCCTCGCTGG GCGGGGACAT TGACCAGATG GGCAAGGCGC AGCGCCTGGA GATCACCGAT GCCATTACCA GCATGCTGGG CCACGACGAG GATCGCACGA TCAAGGCCTA CTTTTCCAGC TTCTACCGGC CGCTGGCCCA TGTGGGCGGC ATCGGCGGCA AGGTCGGCCC CACCCTTGCG CTAGATCGAA TGCAGGACAT CTTCGTGACG GTCCATGTCA ACCCGGTGCC GGTCAGGGCC AAGGACGGCA GCTACCGCAT CCAGAGCGTG GCCGAGCGTG CTGCTACGGC AGTGACGTGC GTGCTGGAAA ACCCCCCGCA GGAGGACCGG CACTTTGACG TGGTGAGCTT TATCGCCGAG TACCCGCAGT TTGCCGAGCG CATCAGGAAG TCGCTCGTGG CCGTGGGGCT GGGCGATTAG
|
Protein sequence | MTVVQSGAIG SLIKSADAIV ERHGAVRVNG KVASIRTIEI SRQVMRESCH RLHGLGFYLS DISSLKEKHI HALVRDWHAT GSRSGKPLAN KTMQNQLSRL RIFAGWLGKP EIVKPGGLAV YLPEVEASSL KVRTYTERSK SWTGNGVDLV EIIGRARLED ERVWAMLLMG VAFGLRKKEM LRIQPWRADA LCELRIDGSV AKNGRARSIP FIGAGHPYGL FQRWCLDQAR RVTKRGQTLG WPDLSFKQSE NRFYHCMKKL GVTQVDSGIS PHGLRAEFAE NMALIRGLVP PSLGGDIDQM GKAQRLEITD AITSMLGHDE DRTIKAYFSS FYRPLAHVGG IGGKVGPTLA LDRMQDIFVT VHVNPVPVRA KDGSYRIQSV AERAATAVTC VLENPPQEDR HFDVVSFIAE YPQFAERIRK SLVAVGLGD
|
| |