Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4336 |
Symbol | |
ID | 4685412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | - |
Start bp | 248837 |
End bp | 249895 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639826195 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_973360 |
Protein GI | 121582918 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.253754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.853513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCTA AAAATTTCAA TTTGGTCGGT TTTGCGTTGG CACTGTCGGC GCTTACCGCT TGCGGTGGCG GCGAAGGCTC AGGCGCAACC ACTGCAGCGT CCGCACCGAG CGCTCAGCCT GCCCCGGTAG TGACGCCGGT TTCAACCGCC TCAACATTGG TGACGGCCGT TAGCCCTTCA ACCTATGCAG TCGGCAGCGA GGAAGCGGCA GCCTTCGACA AGCTCAATGC AGAGCGCAAC GCATGCGGTT TTGGCCTGCT TGCGCAAAAT GCAAATCTCG ATGTTGCGGC AAAGGGCCAT GCCAACTGGA ATGTGTTGAA TGGATATTTT GGGCACTTTC AGATTGCAGG CACCCCTGGT TTCACTGGTG TAACACCACA AGAAAGATTC GCAAAAGCTG GATATACAGT TGGACAGGGA TCGACGGTTG GCGATGAAAG TACATCCGTG ATCTATTCGG GCAACAAAGT TGGTTTCGGT AAGGTTGGCA TGGTAAGGCT GCTTAATGCG CCTTATCACT TAGCCGGGCT GATGTCAGGC TTCAGAGAAG TTGGATTTTC GGTTTTAAGT TCCGATGATA TTGCTGGAAG TGCATTGCGA CAGGTGACCT TACAAGCAAA CTTGGCCTAC AAAGACGTGG ACCAACCGCA ATTAATCGAC GGTAGTTCAG TTGCCACATA TCCATGCGAA GGCTCGACCG GCATCAACCG TCAGTTGGCG GACGAAACAC CTAATCCTGT GCCGGGGCGT GATCTGTCTC GACTTCCTTT GGGAAGTTCT GTCTACATCG CAGTGCGGGA CGGCAACAAG CTCACCATCA CGAATGCGAG CCTCACCAAC CTGGCCACCG GCGTGCCAGT TACCGTGCGG CCAGTCCTCA ATAGCGATAG CGATCCCAAC AAGGTGAACG GCCAAAGCTA CTTTGCAGGC CATCAAGCCT TCATCACGGC TGATGCGCCC ATGGCCGCGA ACACGCGCTA CCAAGTCGTG ATCAACGGAA CGAACAATGG CGCCGCGTTC AACCGCACCT TCATCTTCAC TACAGGCACT GGCGGCTGA
|
Protein sequence | MKAKNFNLVG FALALSALTA CGGGEGSGAT TAASAPSAQP APVVTPVSTA STLVTAVSPS TYAVGSEEAA AFDKLNAERN ACGFGLLAQN ANLDVAAKGH ANWNVLNGYF GHFQIAGTPG FTGVTPQERF AKAGYTVGQG STVGDESTSV IYSGNKVGFG KVGMVRLLNA PYHLAGLMSG FREVGFSVLS SDDIAGSALR QVTLQANLAY KDVDQPQLID GSSVATYPCE GSTGINRQLA DETPNPVPGR DLSRLPLGSS VYIAVRDGNK LTITNASLTN LATGVPVTVR PVLNSDSDPN KVNGQSYFAG HQAFITADAP MAANTRYQVV INGTNNGAAF NRTFIFTTGT GG
|
| |