Gene Pnap_4324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4324 
Symbol 
ID4685353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp235004 
End bp236029 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID639826183 
Producthypothetical protein 
Protein accessionYP_973348 
Protein GI121582906 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.414651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAT TAGACCTAAG CAAAGTAGAT TGGTACGCAA CGCTCCCTCG ACTGGGGATC 
GATCCCAGCA CCATTGAAAA CCCGAGAAGG CTGGGTCCAT GTCCGATAGA AAATGATGGG
AGGACCCGTT TTCGTTTCGT CAACAAAGAT GGTCGTGGCA ACTGGTTTTG TAACTTCTGC
GGAGCAGGCG ATGCGGTCAA ACTGGTGGCG CTCGTCAATT CGAAAACTGA TGCCGAGGCA
ATTCTCATGA TTCGCGATCT GGACAATGGG CCAGGCATCA AGGGACCGCC TCAACGGCTA
AAACCCATCG TGGAACAGCC AAGGGACGTC ACCTGGATAC GAAAGCTGCT GCAACAGGTT
TGGGATGAAA CCAAGCCAAT TCAGGGGTCG GCTGTCGCAC TGTACATCGA GCGCCGTGTA
CCTGGTTTCG ATCTGAACTG GCTTTCAAGT TCACTGGCTT ACCATCCTGA TCTGTACCAC
GTAGATGAGG TGACCAAGAA GAAGAATGTT TTTCCCGCGC TTGTCGGACG TGTGACAGGA
TTGGATGGAA CGCCTGTCAC GCTGCACAGA ACGTATTTAT CCAAGGATGG CTTTAAAGCA
GCTGTCTCAC CAGGGCAAGT CAAAAAGCAA ATGACCGGTG TGGCAACGCT CAAGGGCGAA
TCCATACGGC TCAATGTGCC TCGCATAAAA ACACGCGTTG CAATCGTGTG TGAAGGCATT
GAAACTGGAC TTGCGCTGGT GGCCGCCACT AAAAATCGCC ATGCGGTTTT TTCCGCGCTC
AATGCAGGCA ACTTGGCCAA GTTCATGCTG TCCAGAGCTG AATTTGATTT GTGCATCATC
TGCGCAGACA AAGATGTTAT GAATATCAAG CACGGCTGGC GACCTGGTGA GCACTTCGCG
GAGATTCTTA GCGAAAAACT CATAAGTGAA GGCTATGCTG TCAAGTTCCG GATTCCGCAA
GTTGAGCAAA CTGATTTTGC GGATTTATGG ATGGATCGCT GCAAATGGCT CAAGCTTGTG
GCTTGA
 
Protein sequence
MARLDLSKVD WYATLPRLGI DPSTIENPRR LGPCPIENDG RTRFRFVNKD GRGNWFCNFC 
GAGDAVKLVA LVNSKTDAEA ILMIRDLDNG PGIKGPPQRL KPIVEQPRDV TWIRKLLQQV
WDETKPIQGS AVALYIERRV PGFDLNWLSS SLAYHPDLYH VDEVTKKKNV FPALVGRVTG
LDGTPVTLHR TYLSKDGFKA AVSPGQVKKQ MTGVATLKGE SIRLNVPRIK TRVAIVCEGI
ETGLALVAAT KNRHAVFSAL NAGNLAKFML SRAEFDLCII CADKDVMNIK HGWRPGEHFA
EILSEKLISE GYAVKFRIPQ VEQTDFADLW MDRCKWLKLV A