| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4304 |
|---|
| Symbol | |
|---|
| ID | 4685318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | + |
|---|
| Start bp | 212963 |
|---|
| End bp | 213877 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639826163 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973328 |
|---|
| Protein GI | 121582886 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03299] phage/plasmid-related protein TIGR03299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.126034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.2404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG CAGGACAGGT GCCTTGGCAC GGCCTGGGTC AGAAAGTCGA AGCAGACGCA
TCCATTGAAG AGTGGATGGC ACAAGCCAAC ATGGAATGGG AAATTAAGAA TTCACCCGTC
ATGTACCAGA ATGGAGAGAT GCACGAGGCT CCGGAATATC GGGTTCTCTA CCGCAGCGAT
ACCAATGCGC ATTTGTCGGT GGTCTCCGAC CGCTACAAGG TGGTGCAACC AAAGCAGATG
ATGGAATTTT TCCGTTCCCT AGTGGATGCG GAAGGTTTTA CCATTGAGAC GCTGGGTTCG
CTCAAAGGCG GTCGCCGCAT CTGGGCATTG GCCAAGACCA ACATCGAGGA CACGATTCGC
GGTGGTGACC TTATCAAAGG CTACCTGCTG CTTATCACGT CGTGCGACGG AAGCTTGGCA
ACGACTGCCA AGTTCATCTC GACCAGGGTT GTTTGCTGGA ATACGCAAGC TATTGCCCTT
GGCGAAGCCG GCCAGGAAGT AAGGGTGCGT CACAACACCA CCTTCGATGC CAACGCTGTC
AAAGGCCAGA TGGGGTTGAT CGGCCGTGTC GCCTTTAACG GGTTCATTGA CCGCATGCGC
AATCTGGCAT CGGTCAATCT CAGCACGCAC GATGCGAAAT CAGCCTTGGG CTTGATTTTG
CCGGCGCCAA CAGGTGCAAA GGAACTTGAA GAGACGAAGG GCTTTCGCAA GATTCTGGAC
TTGTTCCAGG GTGGGGCGAT GGGCTCGAAC CTGCCTGGGG TGGCCGGTAC TGCCTGGGGA
TTTCTTAACG CAGTCACCGA GTACACCGAC CACCACATCC GTGCACGCAC GACGGAAAAC
CGCCTCGACT CGGCCTGGTT CGGCGCCGGG GCGAATCTGA AAGCGACGGC AGAAGAAGTT
CTTCTGACAC TGTAA
|
|---|
| Protein sequence | MAYAGQVPWH GLGQKVEADA SIEEWMAQAN MEWEIKNSPV MYQNGEMHEA PEYRVLYRSD
TNAHLSVVSD RYKVVQPKQM MEFFRSLVDA EGFTIETLGS LKGGRRIWAL AKTNIEDTIR
GGDLIKGYLL LITSCDGSLA TTAKFISTRV VCWNTQAIAL GEAGQEVRVR HNTTFDANAV
KGQMGLIGRV AFNGFIDRMR NLASVNLSTH DAKSALGLIL PAPTGAKELE ETKGFRKILD
LFQGGAMGSN LPGVAGTAWG FLNAVTEYTD HHIRARTTEN RLDSAWFGAG ANLKATAEEV
LLTL
|
|---|
| |