| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4277 |
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| Symbol | |
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| ID | 4685243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 170793 |
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| End bp | 172820 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826136 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_973301 |
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| Protein GI | 121582859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGT TCGACAAGCT GCACCCGGCG CTGCAGTACC ACGTCGTCAA TTCGCTGGGC
TGGAGCAGCC TGCGGCCCAC CCAGTTGCAG GCGATCGAGC CGATTCTCTC GGGCGTGCAT
TGCCTGCTGC TGGCGCCCAC GGCCGGCGGC AAGACCGAAG CGGCCATCAT TCCGGTGCTC
TCGCGCATGC TGACCCATGC CTGGCCCGGC GTGAGCGTGA TCTATGTCTG CCCGATCAAG
GCACTGCTCA ACAACCTGGA GCAGCGGCTC TCGCATTACG CCAGGCTGGT GGGCCGGCGC
GTGGCGGTTT GGCACGGCGA CGTTTCGCAG TCGAAAAAAG GGCATGCGTT AAAGGATGCC
CCCGACATCC TCCTGACCAC GCCCGAGTCG CTCGAAGGCA TGCTGGTCTC CACGCGCATT
GACCGCAAAG TCTGGTTTGG AAACTTGCGC GTGGTGATTG CCGATGAGCT GCATGCGTTT
GCCGCCGATG ACCGCGGCTG GCACATGCGG GCCGTGCTGC ACCGCCTGCA GCAGTACGTG
CCCCAGGAGA TGCAGCGGCT GGGCCTGTCG GCGACCGTGA GCAACCCGGC CGAACTGCTC
GATTGGTTTG CGCCCACTGG CATCAAGCAG GTCGTCGGAA GCGCCAGCGT GAGCACCGAT
GCCGATGTCA CCGTGGATTT TGTCGGCTCT CTGGCCAATG CCGCCACCGT CATTGCTCGT
CTGCATCGGG GCAGCAAGCG CCTGGTTTTT AGCGACTCGC GCAGCAGTGC CGAGCAGCTC
ACCAGCATGC TACGCGCGCA GGAGGTGCGC ACCTTTTTAA GCCATGCGTC CCTGAGCCAC
TCGGAGCGAA AGCTGGCGGA AACCGCTTTT GCCGAGGAAA AGGATTGCGT GATCGTGGCG
ACTTCCACGC TGGAGCTGGG CATCGACGTC GGGGACCTTG ATCACGTGAT CCAGATCGAT
GCGCCAGCGA CGGTGTCGTC TTTTTTGCAG CGCATGGGCC GCACCGGACG GCGGGAGGGC
GCCAGGCGCA GCTGCCTGTT CCTGTGCACC AATGACGATT CGCTCATGCT GGCCATTGGT
ATCTGCCGGC TGTGGGGTGA GGCCTGGGTG GAAGCCGCTT ACCCGCCCCC GGAACCCTGG
GCGCTGGTGG CCCAGCAGGC CATGGTGGCT ACCTTGGAGC GCGCGCAATG GCCACGGCGA
GAATTGATCG CGCTGCTGTG CGGAGCGTTT CCGGAGTCAA GCAGGCCAGG CATCACGGAC
GTGATCGACC ATATGGTGGC CTCAAGCTAC CTGATGGACA CGCACGGCGT GCTGCAAATT
GGCCCCGCGA CTGAAAAGCA GTTCGGGCGG GCGCATTACA AGGACCTTCT GGCCTCGTTT
TCCGGGACGC AGTTGCTGCT GGGGCGTTGC GGCAGCGCCG AAGTGGGCTA CATCGACCCC
ACGATGCTGG CCGGCGACAA ACCGGTTCGC TTGATCCTGC TGGCCGGAAA AAGCTGGCGC
ATCACGGAGA TCGACTGGAA GCGGCAAACG GTGTGGCTCG AGCCCGCCAA GGAAGGCGGC
ACGGCGCGCT GGAACGGCAG CGGACGGACC CTGAGCCGTG AGATCGCCCA GGGCATCCTG
CGCGCATTGC GCCAGGGTGC AGGCGAACAC ACCGTGATTT CCAAACGCGC CCGGCTTGAA
ATCGAGCAGG TCACTCAAGA CCTGCCCGAA ACTGGCAATG ACGGCGCCCT GTCAGTCACC
AGGAATGAAG CGGGTGCGGC CCGTCTGTGG ACTTTTGCTG GCACGCGCGC GAACCGCACC
CTCGCCAGGC AGATTCAATC GCTGGCCGAA AGCAGGCGCA TTGATGCGAT GGGCATTGAC
CTGAAAACGC CCGTTGACCT AAGCGATCTG AGCGCCGAAC TGTTGTCCAC GGCGCTTGCG
TTTTCGCCCG AGGAAGTGAA GGAGCTTGCC AAGCCGATCA AGTTCTCGGA GTGCCTGCCT
GCCACATTGC TGCTTCAGAT TATTCGAAAA AGACAGTTTG GACTTTAG
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| Protein sequence | MSEFDKLHPA LQYHVVNSLG WSSLRPTQLQ AIEPILSGVH CLLLAPTAGG KTEAAIIPVL
SRMLTHAWPG VSVIYVCPIK ALLNNLEQRL SHYARLVGRR VAVWHGDVSQ SKKGHALKDA
PDILLTTPES LEGMLVSTRI DRKVWFGNLR VVIADELHAF AADDRGWHMR AVLHRLQQYV
PQEMQRLGLS ATVSNPAELL DWFAPTGIKQ VVGSASVSTD ADVTVDFVGS LANAATVIAR
LHRGSKRLVF SDSRSSAEQL TSMLRAQEVR TFLSHASLSH SERKLAETAF AEEKDCVIVA
TSTLELGIDV GDLDHVIQID APATVSSFLQ RMGRTGRREG ARRSCLFLCT NDDSLMLAIG
ICRLWGEAWV EAAYPPPEPW ALVAQQAMVA TLERAQWPRR ELIALLCGAF PESSRPGITD
VIDHMVASSY LMDTHGVLQI GPATEKQFGR AHYKDLLASF SGTQLLLGRC GSAEVGYIDP
TMLAGDKPVR LILLAGKSWR ITEIDWKRQT VWLEPAKEGG TARWNGSGRT LSREIAQGIL
RALRQGAGEH TVISKRARLE IEQVTQDLPE TGNDGALSVT RNEAGAARLW TFAGTRANRT
LARQIQSLAE SRRIDAMGID LKTPVDLSDL SAELLSTALA FSPEEVKELA KPIKFSECLP
ATLLLQIIRK RQFGL
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