| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4276 |
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| Symbol | |
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| ID | 4685238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 168340 |
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| End bp | 170277 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826135 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_973300 |
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| Protein GI | 121582858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.237058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA CTCGGCTGCG GATCAGCAAC TTTCAATCTT TCGGGCCCGT GCCAACCCCC
ATCGATTTCG AGGCGATGAC CTTCCTGCTC GGACCGAACG GTGCCGGCAA GACCGTTGTG
CTCCAGGCGC TGGCGAGGCT CTTCGGATTC GACCCGTCGC TGCGACGGGT GCGCCGTTCT
GATTTTCACA TCTCCCCAGC AACCTTGGCT GCAGGCAACG CCGGCACCCT GAACTTGTGG
ATAGAGGCGC AGTTTGAGTT CCCCGAACTG CTGGATGCGA ACGGCCAGCA TGCCACCATC
CCGGGCCACT TCTCGCACAT GCAGCTTGAC TCCGCCGATG GCGTACCCAG AGTGCGTTTT
CGCTTGACAG CGATCTTGGA CGAGGACGGT GACATCGAGG AGAAGATGCA TTACGTGATC
CATGTCGATG CCAATGACGA GCCCGTCAAT CCCATGGTGG TGCCAAAGCA CGATCGCAAC
TCGATCCAGG TCCACTACCT ACCCGCGCGT CGCGATCCGA CCGACCACAT CTCTTACACG
GCAAGCTCGC TGCTCGGACG CACTTTGCGC GCAGCCAACT GGCATGCGGA ACGCGCCACA
GTTGCAGGCC TCACACAGGG CATCAGCGCC GCGCTCGCTT CCAATGCGGG TGTCCAAGGC
ATCGGCGAGC AGATGGCTGG GCACTGGCTG AAGCTACACA AGGGCAGCTA CTACGCGAGT
CCTTCTGTTT CGTTCGAACA CAATGAGATC GACAACTTGC TCAGGCATTT GACGATTGGC
TTCACACCTG GGCACGAGGC ATCAATGGTG GATTTTTCCC GCCTAAGCGA TGGTCAGCAG
TCGCTGCTGT ATGTCTCGCT CGTGCTGTCC ATTCAGGGCA TCGGGCGGCG CGTGCTCGCC
GGTCAACTTG ATGCCTTCGA CATCGACAGG TTGCGGCCAG CCGTCTTCAC GCTGATGGCG
ATGGAAGAAC CGGAAAACAG CCTCTCGCCG CATTACCTCG GCCGCGTCAT CAAGGCCCTC
ACTGACTTCG CAGGCCACCA TGACGCGCAA GCGGTGGTCG CCACGCATGC GCCATCCCTG
CTGCGAAGGG TGCCGCCCGA AAGCATCCGC TACCTGCGGC TCGATGCTGC GCGATGCACG
ACGGTCAAGA CAATTGTCAT GCCTGCAAAG ACCGACGAAG CCCACAAGTT CGTCAGGGAG
GCGGTGCAGG CATTTCCGGA ACTCTACTTC TCGCGACTGG TGATTCTTGG CGAAGGCGAC
AGCGAGGAGA TCGTGCTACC GCGCCTGTTC CGAGCCATGG GGCTTGCCGA CGACGACACA
TCAATCGTAA TCGCACCGTT GGGCGGGCGT CACGTCAACC ACTTTTGGCG CTTATTAAGC
GGCCTTCAGA TTCCTTACGT GACCCTGCTG GACCTGGATG TTGGACGCCA TCAGGCTGGG
TGGGGCCGGA TTCGCTACGC AGCCAAGCAG ATTTTGGCGC TCTGGCAGTC GACTCCTAAC
CTGACACTGG AAGCCATCGA GGCGCTGCCT GCATGGAACG GGCCCGACCA GATTCTGTCC
TCGTCGCAAG GTGCGAAATT GCTGAGTTGG CTTGAGAAGC AAGGGGTGTT TTTCTCGTCG
CCGCTCGATC TCGACTTCTC AATGATTCAG GCCTTTCCTG GGGCCTATGG CGTATCACAG
GCGGAACTGG TGGCGGCAGA CGACCCGACT GTCAAGTCCG TACTCGGCAA AAGCGGCCTC
GGTCCCGATC AGTACAGCAC TGACCAGCAA AGCTACTTTT CTGCCTACCA CGCGCGGTTC
AAGCTCGGAA GCAAGCCTGC GGCGCATCTC GAGGCGCTTG CCAAACTCGA TGATGCGGCC
TTGACTGCAG GCATGCCGCC GCCGATCGCA AGACTGATCG CCTTGGTCGA GAAAAAACTT
GCGGACCTAC CTGAGTGA
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| Protein sequence | MKLTRLRISN FQSFGPVPTP IDFEAMTFLL GPNGAGKTVV LQALARLFGF DPSLRRVRRS
DFHISPATLA AGNAGTLNLW IEAQFEFPEL LDANGQHATI PGHFSHMQLD SADGVPRVRF
RLTAILDEDG DIEEKMHYVI HVDANDEPVN PMVVPKHDRN SIQVHYLPAR RDPTDHISYT
ASSLLGRTLR AANWHAERAT VAGLTQGISA ALASNAGVQG IGEQMAGHWL KLHKGSYYAS
PSVSFEHNEI DNLLRHLTIG FTPGHEASMV DFSRLSDGQQ SLLYVSLVLS IQGIGRRVLA
GQLDAFDIDR LRPAVFTLMA MEEPENSLSP HYLGRVIKAL TDFAGHHDAQ AVVATHAPSL
LRRVPPESIR YLRLDAARCT TVKTIVMPAK TDEAHKFVRE AVQAFPELYF SRLVILGEGD
SEEIVLPRLF RAMGLADDDT SIVIAPLGGR HVNHFWRLLS GLQIPYVTLL DLDVGRHQAG
WGRIRYAAKQ ILALWQSTPN LTLEAIEALP AWNGPDQILS SSQGAKLLSW LEKQGVFFSS
PLDLDFSMIQ AFPGAYGVSQ AELVAADDPT VKSVLGKSGL GPDQYSTDQQ SYFSAYHARF
KLGSKPAAHL EALAKLDDAA LTAGMPPPIA RLIALVEKKL ADLPE
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