Gene Pnap_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4268 
Symbol 
ID4685224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp155091 
End bp156239 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID639826128 
ProductDNA-repair protein 
Protein accessionYP_973293 
Protein GI121582851 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGC CCTGGTTCGA GATCGAGCAC CTGGCCGAGT CAAGCGGGCT GGTGGCGCTG 
TCGGCCAACT TCGCGCTGTA CGGCGACATG AGCGACCGCA TGATGAGCCT GGCCGCCGGC
CTCGGGCCGG CGCAGGAAAT CTACTCGATC GACGAATCGT TCATCGACCT GGCTGGCGTG
CTCGGTGACC TGGTGCAGCG CGGCCTCAAG GTGCGCGAGC GCATCCTGCA GTGGACGGGC
ATCCCCTGCG GCATCGGCAT CGGCGCGACA AAAACCCTGG CCAAGCTGGC CAACCACATC
GCGAAAACTG CCGAGCGCAA GCCGGGAAGC TATCCCGCGA CCATGGCGCA GGTGTGCGAC
CTGTCGGCCC TGGCGCCGGA AGCGCTGCAA GAAGTGCTGG CCGCCACGGC CGTGAATGAG
GTCTGGGGCG TCGGGCGGCG CCTGACGGCC CAGCTCAGCG AATGCGGCAT CCACACTGCG
CAAGATTTGG CTGGGCTCGA CCCCGCGATG GTGCGCCGGC GCTGGTCGGT GGTGCTCGAG
CGCACGGTGC GCGAGCTGCA GGGGATGGCG TGCATTGCAT TGGAATTGGC CCCGGCGCGT
AAGCACGAAA TTGCCTGCAC CCGCTCGTTC GGGCAGCCGG TCACTCGTCT AGCGGACCTC
AATGAAGCGG TCACAGAGTT CGCCAGCCGG GCGGCGCACA AACTGCGCCA GCAAGGCAGC
CTGGCCGGCC AGGTGCTGGT GTTTATCCGC ACCAGCCCGT TTCGGCCAGA AGCGCAGTTC
AGCCGCTCGA TCAGCATGCC GCTGCGCCGT CCCAGCGCCG ATACCGGTGT GATCGTTTCG
GCAGCGCTCA GGGGCCTGCA CGCCATTTAC CGGCCTGGCT ACCAGCTGGC CAAGGCCGGG
GTCATGCTGT TCGACCTCCA GCCCACCACG GTGCTGCAGG CCGAGCTGGA TTTGCAACGC
GACGAAGCAC CAGACAGACG CAGGCTGATG ACAACGCTGG ATGACATCAA CCAGCGCTAC
GGCCCGAGCA CCGTGCAGAT GGCCAGCGCC GGGCTGGCGG GCGACAGGAG GGCCTGGACG
ATGAAACAGG AGCGGCGCAC GCCGGGCTAC ATCACGTGCT GGGCGGATAT GCCGGTGGCG
CGGGCTTGA
 
Protein sequence
MGAPWFEIEH LAESSGLVAL SANFALYGDM SDRMMSLAAG LGPAQEIYSI DESFIDLAGV 
LGDLVQRGLK VRERILQWTG IPCGIGIGAT KTLAKLANHI AKTAERKPGS YPATMAQVCD
LSALAPEALQ EVLAATAVNE VWGVGRRLTA QLSECGIHTA QDLAGLDPAM VRRRWSVVLE
RTVRELQGMA CIALELAPAR KHEIACTRSF GQPVTRLADL NEAVTEFASR AAHKLRQQGS
LAGQVLVFIR TSPFRPEAQF SRSISMPLRR PSADTGVIVS AALRGLHAIY RPGYQLAKAG
VMLFDLQPTT VLQAELDLQR DEAPDRRRLM TTLDDINQRY GPSTVQMASA GLAGDRRAWT
MKQERRTPGY ITCWADMPVA RA