| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4265 |
|---|
| Symbol | |
|---|
| ID | 4685216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | - |
|---|
| Start bp | 149350 |
|---|
| End bp | 151158 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639826125 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973290 |
|---|
| Protein GI | 121582848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGC TCAACCTCTT TTCCTCGATG CTGAACCAAG CGGCGCTCAA CTCGCCGGTG
GATGTGCGTG CCAGCGACGA CATTGACAAG GTGCTCCTGG CATTGGAAAA GCAGGTCAAG
TCCGGAGGAC GAAACGACGA ACCCAAGGAC CTGCAGATCG AGGCGGTTCG CCGCTTCTGG
AAGACAGGAC ACGTCGAAAC CTTGCGCGAG GCCCGCCTGG TGGCCTTTGG CCTGGCGGTG
ACACCCTGGG ATGACCGGCG CAGCCTGATG GAAGACAAGC GCCTGTTCGG ATCCGCGCTT
GATGCCGTCG ATGCCTGGCA GGGTGCGCCG AGACAGTACC GAAAATGTTT TCAAGGACTG
GTGCGCAGCT ACTTCGACTA CGACGGCATG GGCCGGAGCA CGCCCGACGT TGGAAAGGTG
AACTGGCGCC AGCTGCGTGA TTATTTGAAC AGCAACGCAG CCAGCATTCG CGATGCCAGC
CTGAATCCGG ACTGGGTGAG CTGTACCTTG TCGAACACGG GCCTCTTCAC CGAGGAGCCC
TGCGCTGCTT ATGGCCCAGA CTTGCTGGCA GGCAACAGCG ACCTTGTCGG TGACATCCGC
AAGCTGCTGG GCATCAGCGA CGGCTCGTGG TTCACGCGCG AGCTCATCAT CGCGCAGATC
CGTCAAGCAA CGCAACTGGG CGATCAGGCA TTCCATGCTG CCGTGAGCGG ATTGTTGCGC
CTGCTCGGCG GCAATGAGGT TTTGCGCGAC CGTGGCCTGC AAATCCTTCT TGACCGTTAT
GCCCTGATTC CACAGCCCCC CCAACACCCG TCCCTAAGGG ACTATGCGGT CACCTGTTGG
GGCAACCCCT GGTTGCCTTC CAACCAGGAC CGCTGGGGCG GCGTGCAAAC GGCTGCGCGC
CAGATGGTGT CGAACTGGCT CAAGCTGGAG TTCATTGAAC TGTTTTTCAC CAAGCTCGCC
CAGGATGGGC TGAGCGATAC CCGACGCGTG AAATTCTGGG CCAAATACGT GCCTGCCATT
GAGGAAATCC ACTTCGCACT GGGTCCTCAC GCGATGTACT CACGGGAGCG CGACTTTGTC
GAGCTCAGGG ACAAGCTCAA GGGACTGATC GTCCCCTTAC AAGACAACAT CGCCGCCAAC
AACGCGTTCA TCATGACGAT GGGCGATTTG GTCGCAGTGG AGTTCAGCGG GGCGTCGAAT
GCCTTTTACG GCTACAACGT GAAAAACCGC ATGCCGTTTG ATCTGACGCA GCCGGTACGC
ACGCCTGTCA ATGGTCAAAA TTCCTTAAAA AACAGCTCCA GAGCACTTTA TCTGCGTCAT
CAGGACAATG TTTTAGGCTT CAATGGCTGG GAAGGTCGCT TCCAGGACGA GTTGAGGACG
AAGTTCAACA TCCGCCCCGG GGTGACATCG CCGCAGCGGG TCGTGGTTGA ACGTCAATGG
AATGATGCGC CAGCGCCGCC GCATCCCAAA TCACCGCAGA CACCGCTCTT CGCCGCACGC
ACCTTGGCTC CTGCTGCCTC AACGCGGCCC ATGCCACGCA CCTTCACAAC ACCAGCTCCA
GTTCCAAAAT CGACGGCTCC GGCCTTCGCC ACTGATCAGT CTGCCCCTTT TGCCCCCGAT
CTGCCTTTCA CCATGGACAA CCTGCGTGAA GTCTGCATGC GAATCGGGGC CTCGGTGCAG
GACCGCTCCG ACAGAGGTGG CGCCCTCTGG GTGATGGCGC CGGCCCACAT ACCGCATATC
CGGGAGCTGC TGACGAACTG GGGTTTCAAA TTCACCATCG GCAAGGGCTG GTGGAAAAAA
ATCGAATGA
|
|---|
| Protein sequence | MDLLNLFSSM LNQAALNSPV DVRASDDIDK VLLALEKQVK SGGRNDEPKD LQIEAVRRFW
KTGHVETLRE ARLVAFGLAV TPWDDRRSLM EDKRLFGSAL DAVDAWQGAP RQYRKCFQGL
VRSYFDYDGM GRSTPDVGKV NWRQLRDYLN SNAASIRDAS LNPDWVSCTL SNTGLFTEEP
CAAYGPDLLA GNSDLVGDIR KLLGISDGSW FTRELIIAQI RQATQLGDQA FHAAVSGLLR
LLGGNEVLRD RGLQILLDRY ALIPQPPQHP SLRDYAVTCW GNPWLPSNQD RWGGVQTAAR
QMVSNWLKLE FIELFFTKLA QDGLSDTRRV KFWAKYVPAI EEIHFALGPH AMYSRERDFV
ELRDKLKGLI VPLQDNIAAN NAFIMTMGDL VAVEFSGASN AFYGYNVKNR MPFDLTQPVR
TPVNGQNSLK NSSRALYLRH QDNVLGFNGW EGRFQDELRT KFNIRPGVTS PQRVVVERQW
NDAPAPPHPK SPQTPLFAAR TLAPAASTRP MPRTFTTPAP VPKSTAPAFA TDQSAPFAPD
LPFTMDNLRE VCMRIGASVQ DRSDRGGALW VMAPAHIPHI RELLTNWGFK FTIGKGWWKK
IE
|
|---|
| |