Gene Pnap_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4233 
Symbol 
ID4685322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp105034 
End bp106392 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content53% 
IMG OID639826093 
Producthypothetical protein 
Protein accessionYP_973258 
Protein GI121582816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.625642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA ACAACCAGTT AGCTGAACCG GTCCTACTGG GAGATGGCTC CGTTGCCCCG 
CCAGGAGTGA CAATTATTCT GGGCATGACC TGGAAGGTGT TGCTGGGGCA AAAATTAGGT
GCGATGGCTG TGCAGGCTGC TGTGCTGGCC AAGGCCAGCC ACTACACCCA TACGCCCAAC
ATCGGCAGTG TTGGTTACAC CAATCTCAAG CCGGGAGTCA AGACGACCTA TATTTCTGCT
GCAGGCATTG TGGCTTCACA GAAAACGATG GGTGACTTTC TCATCGGCCT GGCCCTTAAC
GAGACTGATA CGTGGCTTTG CGGAGTTTCA AACGGCTCGG TTGTCTCGGG ATATGACATC
GTTGTTAACG ATGCGCTGAC CTTCGAGAAG ATCGTCAATG CGTTCAAGGT CCGTTTTGAA
GAGGCACACC TGATTGGTGA TGTCGAGCTC GGGTTCGCAG CCGAGTACGG ATGGGATGCA
ATTTCAGAAG GGCTCGCATC GAAGGAATTT CGTAAAAATG CGACGATCCG ACCGACAAGC
AAAGGATTGA GCGAAAGGTT CGAGGCCGTT CCGAAAAAGG TTCTTTACAT CGGTGGCATT
GCACTGATTC TGCTGGTGGG GCAGCGTTTC ATCGTTCCAG CCATCTCCAA CGTCTTCCAC
AAGCCCAAGG AAATTGCGGT CATCGACCCT AGCGAAGCGT GGAAAGACGC TTTGGACGAA
TGGGTCCGCG CTCATCCGGT GTCGAGTCAA GGAAGCTTGA ATGAATTGCT TGACGCTCTG
GCAAACCAGC CCCTGGTAGT TGCAGGGTGG CAGGCATCAG CGTTCGATTG TGTCTGGGGC
CAGAAATCCT GGCAATGCAC AACTAAATAC TCTGCAAGCA AGCGCAGCCA TACCAATCAA
GCCTTCGAAG CGGCGAAACC CAAAGACTGG ATCACTACGT TTACACCGAT GAGGGACGTT
CAGGTGCGCT ATGACATAGC AGCCAGCGCT GTAAAACTCG ATGTGAAGTC GCTCAAACCT
GTCGCCGACT ATGAGCTGAT CACCATGTCA CAGCTGCAGC AGATCACCCC CCTTATTGCT
GACTCGGCAG CGCCCATGGG AACGTTTGTA AAAGTGCCAG TCCCCGAGCC AAAAACAAAC
GAAGGCCAGC CTATTGCATT GCCAGCGGAC ATGCTCATTC CAAAAGTCAG CATGCTCAAG
ATCATCGCTC CGCTGCGTGA CATTGCAGCA TTTCAGACTT GGATTAATGA CGTTGCATGG
ACCAACGTAT CACTGCGGAT CGAACGCGGC AAACAACCGA GCGCCAAGGA CTCCGCCATC
ACCATGGAAC TCAAGGGAAA CTTCTATGCC AAAAACTAA
 
Protein sequence
MSANNQLAEP VLLGDGSVAP PGVTIILGMT WKVLLGQKLG AMAVQAAVLA KASHYTHTPN 
IGSVGYTNLK PGVKTTYISA AGIVASQKTM GDFLIGLALN ETDTWLCGVS NGSVVSGYDI
VVNDALTFEK IVNAFKVRFE EAHLIGDVEL GFAAEYGWDA ISEGLASKEF RKNATIRPTS
KGLSERFEAV PKKVLYIGGI ALILLVGQRF IVPAISNVFH KPKEIAVIDP SEAWKDALDE
WVRAHPVSSQ GSLNELLDAL ANQPLVVAGW QASAFDCVWG QKSWQCTTKY SASKRSHTNQ
AFEAAKPKDW ITTFTPMRDV QVRYDIAASA VKLDVKSLKP VADYELITMS QLQQITPLIA
DSAAPMGTFV KVPVPEPKTN EGQPIALPAD MLIPKVSMLK IIAPLRDIAA FQTWINDVAW
TNVSLRIERG KQPSAKDSAI TMELKGNFYA KN