Gene Pnap_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4215 
Symbol 
ID4685271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp90124 
End bp91254 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content45% 
IMG OID639826075 
Producthypothetical protein 
Protein accessionYP_973240 
Protein GI121582798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.314419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.580707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG AATATATTTA TGACCGCGCT GCGGTCCGCT TGAAGGGTGT TCGCTTTGAG 
TACATAGCAC TTTATATTCT GAGCCACTCC AACAACGTTG ACCCATATAT TCCCAACTGG
AATCTCTACG GCTTTTCAAA ATTGGAAGAT GCTCTTGATA TTCCACTGAA GTATTGCTAC
TACTGTGATG ATGGGATTAC GCGCGGCAAG AAAGGTCAAA TGATCAGTGG TGAATTTGAC
ATTAATAAAT GGCGCGTGGC AATCGAAAGA GCGCCGATCA TCAAGGATGA GTTCAGGCTG
CAATTGAAAT TTTGTGATGA AAAACATAGT GAATCGCATC CTCTGCTTAA ACTTGAAAAA
ATTAAAGCAT TTGCGGTTCA GTTAGATTTG CATTTGGAGA TCGAAAGCAT TCTAGGGCAC
TCGGAAGCTG CATGGCTTGT GTTGGACCTG AACAATCCTG AACATGTTGA TTTGGCCTGG
GCTACAACTC GGGACATGAG CGATGCTGAA TCCAATGATT CCTATAAAAG GCTGATGCTG
CCTTTTAATT TTTTACAACG TCAAGTTGCA GAAAGGTTTT TTGGCCATCT TGGGTATTGT
GACGAGAAGA GAGCGTCAGC CACAGTGCTA CGGAAACAGT CCAACTTCGA TCTCCCAGAA
ACAATCTACA AATTTGAATT CCCTGTGGAT GATCAACCCG TTTACAAGGA TGTCCGGTTT
GTTGTGGTCA ATTGGCTGGG CAGGATTTTG AGCTGCAGTC CAGATCGCTG GTTTTGCCTG
AAATTGATCG AGCTGGAAAA GAAGCATCTG GGAACGGCTG AGTCTGCGTA CATCAAATTT
AAGAAACACA TGAAAGCTCT CCAAGTCACT TCTCACGAAG GGATGACGAT TGAAGTCATG
GCATCCTTAT CCGGCGCACA GCGTGCAGAA ATGACGCAGT GGGACATGGA CAAACGCGAT
CGACTGTTTG CCCGGTTGCA TAAACCGGGC ATGTCCGCCA TCTTCACCGA AGTAGTTAAG
GACCATATCC AGGCAATGGC ATTGGCGCCA TACATTGAGT GCAATCTTGC GATTTCAGAA
ATGAAAACCG CCAAAAAGCC TCAAGTCGAG CAAATGACTT TCGACATCTA A
 
Protein sequence
MSSEYIYDRA AVRLKGVRFE YIALYILSHS NNVDPYIPNW NLYGFSKLED ALDIPLKYCY 
YCDDGITRGK KGQMISGEFD INKWRVAIER APIIKDEFRL QLKFCDEKHS ESHPLLKLEK
IKAFAVQLDL HLEIESILGH SEAAWLVLDL NNPEHVDLAW ATTRDMSDAE SNDSYKRLML
PFNFLQRQVA ERFFGHLGYC DEKRASATVL RKQSNFDLPE TIYKFEFPVD DQPVYKDVRF
VVVNWLGRIL SCSPDRWFCL KLIELEKKHL GTAESAYIKF KKHMKALQVT SHEGMTIEVM
ASLSGAQRAE MTQWDMDKRD RLFARLHKPG MSAIFTEVVK DHIQAMALAP YIECNLAISE
MKTAKKPQVE QMTFDI