| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4186 |
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| Symbol | |
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| ID | 4685242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 61877 |
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| End bp | 63517 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826047 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_973212 |
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| Protein GI | 121582770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.296115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTG ATTACGTCAT TGTTGGCGGA GGTTCCGCCG GCGCAACACT TGCTGCAAGA
CTGAGCGAGG ACCCCAGCAC CAGCGTGTGC CTGCTGGAGG CCGGTGGCCG CGGCGACGGC
ATCTTGGTGC GCGCCCCGGC TGGCATGGTG GCCATGATGC CGGGCCGCGG CAAGATTAAC
AACTGGGTCC TGCACACCGT GCCTCAGCCC GGCCTCAATG GACGAAGGGG CTACCAGCCC
CGCGGACGCG CCCTGGGCGG CTCCTCGGCG ATCAACGCCA TGTTGTACAT CCGGGGTCAG
CGGCAGGACT ATGACCACTG GGCCAACCTC GGCTGCGACG GGTGGGACTG GGAATCGGTT
CTGCCCTATT TCAAGAAGTC CGAAAACAAC GAGCGGGGAC CAGGCGCCTT CCACGGGGGC
AGCGGGCCGC TGCATGTCTC GGAGCAGCGA AGCCCGCGCC CGATCACCCT CGCTTTCATT
GAAGCGGCCA AGCACTGTGG TATTGCGCCT CGGGCGGATT TCAACGATGG AGACAACGAA
GGCGTAGGCC TGTACCAAGT GACGCAGTTC CACGACGCCG CTCGCCGAGG CGAGCGTTGT
TCCACGGCAG CGGCCTACCT GCACCCGCTC AGGCGACAGC GACCCAACCT CACGATCAAG
ACGAACACAC GGGCCACCCG GATCATCTTT GAAGGCAAAC GGGCCGTCGG CGTGGCCTAC
CGTTCAGCCG GGCGAGAGCA AGAAATTCGG GCGAAGCAAG AGGTGATCGT GGCAGCTGGT
GCCTTCGGGT CTCCGCAACT TCTGCAGCTC TCGGGGGTAG GGCGTCCGGA AGACATCACC
CACCATGGCA TCCGCATGGT GCACGAGTTG CCAGGTGTCG GCCAGAACCT GCAGGATCAC
CTGGACTTCA TCCACGCATT CAAGAGCAAG GACACCGACA ACTTCGGCAT TGGCCTGAGG
GGCACGATGA ACCTGCTGGG CCACATCGCC CAATGGCGCA AGGACGGTAG CGGCATGCTG
GCCACGCCCT TTGCCGAGGG GGCCACCTTC TTCAAGAGCG ACCCGGGCAT TGACCGACCG
GATCTGCAAC TGCACTTTGT GATCTCCGTC GTGGACGATC ATGCGCGCAA GCTGCACGCC
GGCTATGGGT TCTCGTGCCA TGTCTGCTAC CTGCGTCCGT ACTCGCGCGG GGAGGTGTTC
CTCCAGTCGC CCGATCCGTT GGACGATCCT GGCATCGATC CCCGGTTTCT GTCGGACGAA
CGCGATCTCA AGGCCTTGAT GCACGGCGCC AAGGTGACCC GCGAGATTCT GCTGGCACCA
CCACTGAAGA AGTACCGCCA CCGCGAACTG TTCGGCATGA CCGATGGCAT GAACGATGCG
CAATGGGAGC AGCACATCCG CTCCCGTGCC GACACCATCT ATCACCCGAT CGGCACCTGC
AAAATGGGTG TCGACGCCAT GGCGGTGGTC GACCCCGAGC TCAAGGTGCG CGGCCTGCAA
GGCCTGCGCG TGGTCGACGC CTCTGTCATG CCGACGCTGG TCAGCGGCAA CACCAATGCG
CCCACGATCA TGATCGCCGA AAGAGCGGTC GACCTCATCC GTGGTTTTGC CACACGCTAT
TCAACCGCTA TAAGGAACTG A
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| Protein sequence | MNFDYVIVGG GSAGATLAAR LSEDPSTSVC LLEAGGRGDG ILVRAPAGMV AMMPGRGKIN
NWVLHTVPQP GLNGRRGYQP RGRALGGSSA INAMLYIRGQ RQDYDHWANL GCDGWDWESV
LPYFKKSENN ERGPGAFHGG SGPLHVSEQR SPRPITLAFI EAAKHCGIAP RADFNDGDNE
GVGLYQVTQF HDAARRGERC STAAAYLHPL RRQRPNLTIK TNTRATRIIF EGKRAVGVAY
RSAGREQEIR AKQEVIVAAG AFGSPQLLQL SGVGRPEDIT HHGIRMVHEL PGVGQNLQDH
LDFIHAFKSK DTDNFGIGLR GTMNLLGHIA QWRKDGSGML ATPFAEGATF FKSDPGIDRP
DLQLHFVISV VDDHARKLHA GYGFSCHVCY LRPYSRGEVF LQSPDPLDDP GIDPRFLSDE
RDLKALMHGA KVTREILLAP PLKKYRHREL FGMTDGMNDA QWEQHIRSRA DTIYHPIGTC
KMGVDAMAVV DPELKVRGLQ GLRVVDASVM PTLVSGNTNA PTIMIAERAV DLIRGFATRY
STAIRN
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