| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4184 |
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| Symbol | |
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| ID | 4685165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 58305 |
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| End bp | 59330 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826045 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_973210 |
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| Protein GI | 121582768 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.26598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.842889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACATCA CAAACGTACG CGTCACTTAT CTTCGGCAAA TCGCGGATCA GGCGGTTGAG
CTTGGCGTCG ATTTGGCTGC GTGGCTGGCT ATTTCGGAGC TCAAGGAGCG GGATCTGGTC
GATGCGACGG CCTTGATTCC GATTGAGAAA CTCGGAGAAC TCGTGACCGC GGCCATCGCT
CGGTCAGGGG AGTCAGGCTT CGGGGTGCTA GCCGGTTGTC GTTTGATTCC AGGCAGTCAC
GGCATTGTCG GTATGGCGGC TGCGGCAAGC GCCAACATCC GGGAAGCCAT GCAAATCGTC
GAGCGTTTAG TCAGCCTCAG AACGGGTGTC ATCGACATTC GGACCCGCGT GGCGAATGGG
GCGTTCGAGG TCTTTTTCGA GCCCGTATTG GGTTTGGGCC CTGCAAGCAA CCCGGTGACC
GAAATCGCGA TGGTGGCGGT CAAGAATATC GCAGATGACT TGATTCATCA TGGCAGTGCC
TGCAGCAGGG TTGGCTTCAG CTTTCCCGAA CCACCTCATT CTGCACTGGC ACGAGATATT
TTTGGCTGTC AGGTTCAGTA TGGTCAGAAG TGGTCGGGCT TGTCTTTTGC CCTGTCGGCA
GCAGAAGAAG ACGTACCAAA ACATGATGCG CTGGTGCTGG CAGAAGCTGT GCGCATCTGT
ACCGATGAGT TCAAGACACT CCGAAGTAAC AAAAGCGCGA GCGCAAGACT GGAGGGTGTT
ATTCTTGAGC GCAGCCCTTC ATTTCCAACA CTCACATTCT GCGCGCGGTT GCTTGGCATG
ACACCTCGGA CACTGCATCG CCGCCTAATC GAGGAAGGAA CTTCCTACCG AGAAGTCGCT
GAGTCAGTCA GGCACCGCAT GGCATTGGAA CTGCTCAGAA AGAAAGTCAC TGTCAAGGAA
GTGGCCTATT TACTGGGCTA TACAGAAATA GCAAACTTCA GACGGGCATT CAAGCGTTGG
GAAGGTGTGG CACCCTCCGA CTGGTTTGGT CAGAATACAA AACGGGCGGA AAAATTAGCT
AAATGA
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| Protein sequence | MHITNVRVTY LRQIADQAVE LGVDLAAWLA ISELKERDLV DATALIPIEK LGELVTAAIA
RSGESGFGVL AGCRLIPGSH GIVGMAAAAS ANIREAMQIV ERLVSLRTGV IDIRTRVANG
AFEVFFEPVL GLGPASNPVT EIAMVAVKNI ADDLIHHGSA CSRVGFSFPE PPHSALARDI
FGCQVQYGQK WSGLSFALSA AEEDVPKHDA LVLAEAVRIC TDEFKTLRSN KSASARLEGV
ILERSPSFPT LTFCARLLGM TPRTLHRRLI EEGTSYREVA ESVRHRMALE LLRKKVTVKE
VAYLLGYTEI ANFRRAFKRW EGVAPSDWFG QNTKRAEKLA K
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