Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4178 |
Symbol | |
ID | 4685235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 50579 |
End bp | 51550 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639826040 |
Product | patatin |
Protein accession | YP_973205 |
Protein GI | 121582763 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.222124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC CACAAACCAG CAAAGCCCCG GCGGCAAGCC TGACGCCGCC CAAGCGGCCC CGGATCGGCC TGGCGCTGGG CAGCGGTTCG GCGCGCGGTC TGGCGCACGT CGGCGTGCTG CGCGCCTTGA AAGAGGCCAA CATCGAGATC GACCTGGTGG CCGGCACCAG CATGGGGGCG GTCATTGGCG CTGTCTTTGC CTCGGGCAAG ATTGACGGCC TGAGCGCCAG ACTGCGCAAT CTCGACTGGC CGGGCATCGT CGCCCTGCTC GACCCGGTGT TTCCCCGCTC GGGGCTGATC GACGGCCAGC GGGTCGCCGA ATTCGTGCGC GCCCATGTGC CAAGCGCCCA TATCGAGGGC CTGTTGCTGC CCTTTGCCGC GGTGGCCACC GACCTCATGA CGGGAGAAGA AGTGGTGACC ACGGCAGGCG ACCTGACCGA AGCGGTGCGT GCCAGCATCG CCGTGCCCGG CATCTTTACC CCGGTGCGCA GCAACGGCCG CATCCTGGTC GATGGCGGGC TGGTCAATCC GGTGCCGGTG AGCGTGGCGC GCGCCATGGG GGCCGACCTG GTCATCGCGG TCGACCTCAA CCACGACATC GTGGCGGGCC GGCTGTCCCA CCCCGCCGCC CACGCCAATG GCAACGGCCA TGGCCCCATC ATGGCGCGCC TGCTGGAGAG CCTGCGGGCC ATCAATAGCC CGGTGCTGGC GCAGTTCGAG GCCTGGCTGC ACAAGCCCAC TCTGGAGCCG CTACCAGGCA TTTTCGAGGT GCTGCTCGCT TCGATCTACA TCATGCAGGC GCGCGTCACC GAAGCCGACC TGCGGCAAAC CCAACCCGAC CTCCTGATCC AGCCGCCGCT GGGCGCGGTG CGCTTCATGG AGTTCGACCG CGCCGAAGAA ATCATCGACA TCGGCTACCG CAGCGCGGCC GAGCAACTGG CCCGCTGGAC AAGAACGCCA ACCCATGACT GA
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Protein sequence | MNEPQTSKAP AASLTPPKRP RIGLALGSGS ARGLAHVGVL RALKEANIEI DLVAGTSMGA VIGAVFASGK IDGLSARLRN LDWPGIVALL DPVFPRSGLI DGQRVAEFVR AHVPSAHIEG LLLPFAAVAT DLMTGEEVVT TAGDLTEAVR ASIAVPGIFT PVRSNGRILV DGGLVNPVPV SVARAMGADL VIAVDLNHDI VAGRLSHPAA HANGNGHGPI MARLLESLRA INSPVLAQFE AWLHKPTLEP LPGIFEVLLA SIYIMQARVT EADLRQTQPD LLIQPPLGAV RFMEFDRAEE IIDIGYRSAA EQLARWTRTP THD
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