| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4177 |
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| Symbol | |
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| ID | 4685184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 47922 |
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| End bp | 50582 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639826039 |
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| Product | glycosyltransferase family 28 protein |
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| Protein accession | YP_973204 |
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| Protein GI | 121582762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.359054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAT CGCAGACAGC GCAGGGGTTC GGTGCTGACC CGCTCATCGC GCTGGCGCTG
GCGGCCGCGT TCACCCTGTT GGTCGCCCTG GCATGGCTTG CGCTGGTGCG GCAACGCAGC
CGGGCGCGGC ACCCGGCTTC GGACGTGCCA GCAGCGAGCG ATGTCGGAGC CGCCCCGCCC
AGAAAGATCG TCATCTTCTA CTCGTCCATC GGCCACGGCC ACATCAGCGC CGCGCAGGCC
ATCCAGGAGG AGATCGGCCG GCTGGCGCCG GGCGCGCGCG TGATCCTGCA GGACATCCGC
GAGTTCATGC ATCCGCTCTG GCGCTGGGTG GACGAGCGGC TCTACTGGTT CATCGCCGGC
AATCTCCCGG AAAGCTTCGA CGCGCTGTTC CATGCCCTGC AGGCGCGTGG CAACCGGGTG
CCCTCGCTGG CATGGCTGTC CAACGACTAC CCGGAAGACC AGGTGCGCGC CTTCCTGGAG
GCGCAGGCGC CCGACGCGAT CCTTGCCACG CATTACGGAT CGGCGCAGGT GCTCGGAACC
TTGCGCGAGC GCGGGCTGCT GGCGCAGGTG AACATCGGCT GGCTGCACAC GGACTTCTTC
GAAGGCTATT TCCCGCGCAT CTCGAAACGG ATCGACCGCA CCTTTCTCGC CCATCCCGAG
CTGGAAGCGC GCTGGCTGGC CGCCGGCGTG GCACCCGACA AGGTCACCAC CAGCGGCATG
CCGGTGCGCG TTGCGGCCGC CGACGGCAGA ACCCGGGAGA TGGCGCTCAC GGCGCTGGGT
CTCGCCCCGG ATGCGCCCAC CGTGCTCATC ACCTCGGGCA AGGAGGGGGT CGGCGACTAC
GCGCTTGTGG TGGAGAGCCT GGCCCGCCAC CACCAAGGCC CGCTGCAGAT CATCGCCGTC
TGCGGCGCCA ACGCGCGCCA GCAGGCGCTG CTGAATGTGT TGCGGATGGC GCTGCAAAAA
CGCCTGCCGG AGCCGGTGGC GCTGAAGGTC TGCGGCCTGG TGCCGCACGC CGACCTGCTG
GCCTGGATGC GCGCGGCCGA CCTGTTGATC ACCAAGGCCG GGGGCATGAC GCCGGCCGAG
GCCTTCGCCG TGGGCACGCC GACGATCCTG CTGGACGTGG TGAGCGGCCA TGAGCGCGAA
AACGCCGCCT TGTTCGTCCG GCTGGGGGTG GCCGAGCTGG CCGACACCCT GGCGCAGGCG
GGCGAGCTGG CGGCCGCCGT GCTGGCCGAC CCGCAGCGGC AGGCGGCGAT GCGCCACGCC
CAGCACGCCT TTCACGACAG TGCCGACCTC GGGCGCATCG CCCGCTTCGC GCTCGACCCG
GCCCTGCCCG CGCCGGGTAT GACGCCGGAC TTCGGCGCCG AGCACGGTAG TGCCGTCACC
GACATCGACG CGGCGCTGGC GCGGCTCCAG GCCGAGGCGC CCTGCGACAT CGAGCTGCTG
CTGTCCTACT CGACCGCCCA AACACCGCAG CGCGTGGTGC TGGAAAACCC GTTCGGGCAC
ATTGCCATCC GCGTCGACAA CACCGTCTAC AGCGCCAACT ATGTGGCCGT GCCGGGACAC
GACCCGAACC TGTTGCAGCA CGTGACGCTG GCCGATTACC TGTACGGCGT GCAGCCGCCG
TCGCCGTCGC AGGTGCACAC CAACACCTAC GGCATGGCCT ACGGCCGCGA GACGCTGGGC
TTGCGGGTGG CGGGCGTGGC GGCAGAGCGC AAGGCGGCGA TGGTGGCCGA GGCGCACCGG
ATCGAAGATG AGTTTGGGCA AGGCCGCCTG CTGTGGGATC GCAGCGAGTT CAATTGCGCC
GACGTGGTGG TGCGCATCCT GCGTGCGGGC GGCTACGACC GCTCGCCACC GCTGGGGCGG
CGGTGGCTGC CGGTCATGCC GCTGGACATT TTCGAGGAAG CCCGGCAGAC CTGCGAGGAA
GACGCGTCCT TGTACATGGA ACTGGTGGCC TACCGGCAGA TACCGGGCGC CAACGCGGCC
TATCGCTTCT CGCGTTTTCC GCTCTCGCTC GGGCAACCGC TGCGCTCGGT GGCGCGGGCG
CTGCGCGAGG CGCCGCAAGA ACCCCTCGAA GCGGCCGCGA CCAAACAGCT GACCGGTTAT
TTCGGCGACC ACCAGCTTTA TTTCGAGGAT CTGCGCGGCC ACGGGGCTGG CGCCCTGGCC
GACGATCCGG CGCATTTCAG CCGCGTGCAG CGCAGCTTGG CCGACGCCCT GGCGACCGAC
CTGCGGCGCT TGCTGGCGGC CCAAGCCAGA CGGCCCCTGC GCGAGATCGG GCGTCTGGGT
GAGCTTGATG GCGCCCAGGA CATCCGGCGC CTGCTGGAGC GCAGCCTGGC GCTGGCGCGC
ATCGCCACCG AACGGGCCGA CGAGGTGCTG CAAGACCGGG GGGCGCGGCG CATGCGGGCG
CTGTTTACCG AACTCGTGGA CGGGTACGGC CGGATCGGCG CCTGGCACCT GCGGCGCCAG
GAGATCGAGG CCTATCTCAA GCGCTTCCAG GTCTTCGAAG CCGCCGTGGG GCGTGAATTC
CCTGCCCGCC ATGGCGCGCG GCTCGCGCGG GCCACGACGC TCCGGCGCTC ACTGCGGTAC
GGTATCCGGC GTCTGTGCCG GCGCGTCGGT GGGCGGCACC GGCCCACGGG TCATGGGCCG
GACAAGGGGG CAAGCCAATG A
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| Protein sequence | MSGSQTAQGF GADPLIALAL AAAFTLLVAL AWLALVRQRS RARHPASDVP AASDVGAAPP
RKIVIFYSSI GHGHISAAQA IQEEIGRLAP GARVILQDIR EFMHPLWRWV DERLYWFIAG
NLPESFDALF HALQARGNRV PSLAWLSNDY PEDQVRAFLE AQAPDAILAT HYGSAQVLGT
LRERGLLAQV NIGWLHTDFF EGYFPRISKR IDRTFLAHPE LEARWLAAGV APDKVTTSGM
PVRVAAADGR TREMALTALG LAPDAPTVLI TSGKEGVGDY ALVVESLARH HQGPLQIIAV
CGANARQQAL LNVLRMALQK RLPEPVALKV CGLVPHADLL AWMRAADLLI TKAGGMTPAE
AFAVGTPTIL LDVVSGHERE NAALFVRLGV AELADTLAQA GELAAAVLAD PQRQAAMRHA
QHAFHDSADL GRIARFALDP ALPAPGMTPD FGAEHGSAVT DIDAALARLQ AEAPCDIELL
LSYSTAQTPQ RVVLENPFGH IAIRVDNTVY SANYVAVPGH DPNLLQHVTL ADYLYGVQPP
SPSQVHTNTY GMAYGRETLG LRVAGVAAER KAAMVAEAHR IEDEFGQGRL LWDRSEFNCA
DVVVRILRAG GYDRSPPLGR RWLPVMPLDI FEEARQTCEE DASLYMELVA YRQIPGANAA
YRFSRFPLSL GQPLRSVARA LREAPQEPLE AAATKQLTGY FGDHQLYFED LRGHGAGALA
DDPAHFSRVQ RSLADALATD LRRLLAAQAR RPLREIGRLG ELDGAQDIRR LLERSLALAR
IATERADEVL QDRGARRMRA LFTELVDGYG RIGAWHLRRQ EIEAYLKRFQ VFEAAVGREF
PARHGARLAR ATTLRRSLRY GIRRLCRRVG GRHRPTGHGP DKGASQ
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