Gene Pnap_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4172 
Symbol 
ID4685349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp43455 
End bp44072 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID639826034 
ProductTetR family transcriptional regulator 
Protein accessionYP_973199 
Protein GI121582757 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.928216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA AAGCCCCCAA GAAGAAAAAG ATGCGCGAAG AGGTGCTGGA ACGGTCGGTT 
CCGCTCTTCG CAACGGTCGG ATTTGACGGG GTTTCGATGC GTGATATCGC GGCTGCCGTG
GGTGTGACGC CTGCCGCCCT CTACCACCAC TTTTCGGACA AGGAGCAGCT CTATCTGGAT
GCGGTCGGCT ATGCCTTCGA AGAAAAGGTG GGGCCCTTGA AGACACTCCT GGACGGTGGA
GGAAATCCCT GGGAGCGGAT CGAGGCATTC ATCACGCGGC TTGCGAACCT ACTCGCCGCC
GAGCGGGACT TTCTACGCCT GATGCAATGG GTGCTGCTGG ACAGCGATGA ACGGCGCCAA
CGTAGCCTGG TGGACTGCGT TTTTAGAGAC CTGTTCAACG CACTGCGCGA TTTCGCCGCA
GAACTCGCTC CGGGCCATGA CGCCCATCGG CTTGCCGTTT CGATAATCGG CTTGGTGCTC
TATCCCTTTG AAACCCAGTC GGTGCGACGT TTCCTGCCGG GCTACACCCA CCAGCAGGAA
GACCCCGAGG CCATTGCGCG GCATATCGTC GGCTTGCTAC GCAACGGTCT CGGCGGAATC
AACGAGGAAA ATCCATAA
 
Protein sequence
MAEKAPKKKK MREEVLERSV PLFATVGFDG VSMRDIAAAV GVTPAALYHH FSDKEQLYLD 
AVGYAFEEKV GPLKTLLDGG GNPWERIEAF ITRLANLLAA ERDFLRLMQW VLLDSDERRQ
RSLVDCVFRD LFNALRDFAA ELAPGHDAHR LAVSIIGLVL YPFETQSVRR FLPGYTHQQE
DPEAIARHIV GLLRNGLGGI NEENP