Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4172 |
Symbol | |
ID | 4685349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 43455 |
End bp | 44072 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639826034 |
Product | TetR family transcriptional regulator |
Protein accession | YP_973199 |
Protein GI | 121582757 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.928216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA AAGCCCCCAA GAAGAAAAAG ATGCGCGAAG AGGTGCTGGA ACGGTCGGTT CCGCTCTTCG CAACGGTCGG ATTTGACGGG GTTTCGATGC GTGATATCGC GGCTGCCGTG GGTGTGACGC CTGCCGCCCT CTACCACCAC TTTTCGGACA AGGAGCAGCT CTATCTGGAT GCGGTCGGCT ATGCCTTCGA AGAAAAGGTG GGGCCCTTGA AGACACTCCT GGACGGTGGA GGAAATCCCT GGGAGCGGAT CGAGGCATTC ATCACGCGGC TTGCGAACCT ACTCGCCGCC GAGCGGGACT TTCTACGCCT GATGCAATGG GTGCTGCTGG ACAGCGATGA ACGGCGCCAA CGTAGCCTGG TGGACTGCGT TTTTAGAGAC CTGTTCAACG CACTGCGCGA TTTCGCCGCA GAACTCGCTC CGGGCCATGA CGCCCATCGG CTTGCCGTTT CGATAATCGG CTTGGTGCTC TATCCCTTTG AAACCCAGTC GGTGCGACGT TTCCTGCCGG GCTACACCCA CCAGCAGGAA GACCCCGAGG CCATTGCGCG GCATATCGTC GGCTTGCTAC GCAACGGTCT CGGCGGAATC AACGAGGAAA ATCCATAA
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Protein sequence | MAEKAPKKKK MREEVLERSV PLFATVGFDG VSMRDIAAAV GVTPAALYHH FSDKEQLYLD AVGYAFEEKV GPLKTLLDGG GNPWERIEAF ITRLANLLAA ERDFLRLMQW VLLDSDERRQ RSLVDCVFRD LFNALRDFAA ELAPGHDAHR LAVSIIGLVL YPFETQSVRR FLPGYTHQQE DPEAIARHIV GLLRNGLGGI NEENP
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