| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4147 |
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| Symbol | |
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| ID | 4685187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 21312 |
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| End bp | 22142 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826011 |
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| Product | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase |
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| Protein accession | YP_973176 |
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| Protein GI | 121582734 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR03325] cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.180269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA CAGGTGAAGT GGTATTGATC ACGGGCGGCG CCTCCGGCCT GGGGCGCGCC
CTGGTGGACC GGTTCGTTGC CGAAGGCGCC AGGGTGGCGG TGCTCGACAA GTCGGCGGAG
CGGCTCCAGC AAATGGAATC CGACCACGGT GACAAGGTGG TCGGCATCGT CGGCGACGTG
CGCTCACTGC AAGACCAGAA ACAGGCCGCC GACCGCTGCG TGGCCAAGTT CGGAAAAATC
GACACCCTGA TTCCCAACGC GGGCATCTGG GACTACTCGA CGGCGCTGGT CGATCTGCCG
GAAGACCGCA TCGATGCCGC GTTCGACGAG GTCTTTCACA TCAATGTCAA AGGCTATATC
CACGCCGTCA AGGCCTGTCT GCCGGCCCTG GTCGCCAGCC GTGGCAGCGT GATCTTCACG
CTCTCGAATG CGGGCTTCTA TTCCAATGGT GGCGGCCCTC TTTACACCGC AGCCAAGCAC
GCGGTGGTGG GCCTAGTGCG CGAGTTGGCG TTTGAGCTGG CGCCGTACGT GCGCGTCAAC
GGCGTGGCAC CGGGCGGCAT GAGCACCGAT TTGCGCGGCC CTTCCTCGCT TGGCATGAGC
GGTCAAGCGA TTTCGACCGT GCCGCTGGCC GACATGCTGG AGTCCGTGCT GCCGATTGGC
CGCATGCCTG ACACCGAGGA GTACACCGGT GCCTATGTGT TTTTTGCCAC GCGAGGCGAT
ACGGTACCCG CTACCGGCGC CTTGCTGAAC TACGACGGCG GCATGGGCGT GCGTGGATTT
TTCTCGGCAG CAGGGGGCAA GGACTTGCTC GAAAAACTGA ATATCAAATA A
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| Protein sequence | MKLTGEVVLI TGGASGLGRA LVDRFVAEGA RVAVLDKSAE RLQQMESDHG DKVVGIVGDV
RSLQDQKQAA DRCVAKFGKI DTLIPNAGIW DYSTALVDLP EDRIDAAFDE VFHINVKGYI
HAVKACLPAL VASRGSVIFT LSNAGFYSNG GGPLYTAAKH AVVGLVRELA FELAPYVRVN
GVAPGGMSTD LRGPSSLGMS GQAISTVPLA DMLESVLPIG RMPDTEEYTG AYVFFATRGD
TVPATGALLN YDGGMGVRGF FSAAGGKDLL EKLNIK
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