| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4142 |
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| Symbol | |
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| ID | 4685372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 16917 |
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| End bp | 17957 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639826006 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_973171 |
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| Protein GI | 121582729 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.345683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.184923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGC AAGGCAAACA AGTCACCGTT CACGACATGA CATTGCGTGA CGGCATGCAC
CCCAAGCGCC ATTTGATGAC GCTGGACCAG ATGAAAAGCA TTGCCTGCGG TCTGGACGCC
GCCGGCGTGC CGCTGATCGA GGTCACCCAC GGCGACGGCC TGGGCGGCAG CTCCGTCAAC
TACGGCTTTC CGGCCCACAC CGACGAGGAA TACCTGGGCG CGGTGATCCC GCTGATGAAG
CAGGCCAAGG TGTCGGCCCT GTTGATTCCC GGCATTGGCA CCGTCGAGCA CCTGCTGATG
GCCAAGGACC TGGGCGTGGG CACCATCCGC GTGGCGACCC ACTGCACCGA GGCTGATGTG
TCGGAGCAGC ACATCACCAA GTCGCGCGCG CTGGGCCTGG ACACGGTAGG CTTTTTGATG
ATGGCGCACA TGGCCAGCCC GGAAAAACTG GTGAGCCAGG CGCTGCTGAT GCAAGGCTAC
GGCGCCAACT GCATCTACGT CACCGACTCG GCCGGCTACA TGCTGCCCGA CGATGTGAAA
GCGCGTCTGG GGGCCGTGCG CGCCGCGCTC AAGCCCGAGA CCGAACTGGG CTTTCACGGC
CACCACAACA TGGCCATGGG TGTGGCCAAC TCGATTGCCG CGATCGAGGC CGGTGCCAAC
CGCATCGACG CGGCCGCCGC TGGCCTGGGT GCTGGCGCGG GCAACACGCC GATGGAAGTG
TTCATCGCCG TGTGCGCGCG CATGGGGATC GAGACCGGGG TGGACGTCTT CAAGATCCAG
GACGTGGCCG AAGACCTGGT GGTGCCCATC ATGGACCACA TCATCCGCAT CGACCGTGAC
TCGCTCACGC TGGGCTACGC CGGTGTCTAT TCCAGCTTCC TGCTGTTTGC CAAGCGCGCC
AGTGTGAAGT ACGGCGTGCC GGCGCGCGAC ATCCTGGTCG AACTGGGACG TCGCGGCATG
GTGGGCGGCC AGGAAGACAT GATTGAAGAC ACTGCCATGA CCATGGCGCG TGAGCGTGGT
TTGACCTTGG CCGCCGCTTG A
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| Protein sequence | MNLQGKQVTV HDMTLRDGMH PKRHLMTLDQ MKSIACGLDA AGVPLIEVTH GDGLGGSSVN
YGFPAHTDEE YLGAVIPLMK QAKVSALLIP GIGTVEHLLM AKDLGVGTIR VATHCTEADV
SEQHITKSRA LGLDTVGFLM MAHMASPEKL VSQALLMQGY GANCIYVTDS AGYMLPDDVK
ARLGAVRAAL KPETELGFHG HHNMAMGVAN SIAAIEAGAN RIDAAAAGLG AGAGNTPMEV
FIAVCARMGI ETGVDVFKIQ DVAEDLVVPI MDHIIRIDRD SLTLGYAGVY SSFLLFAKRA
SVKYGVPARD ILVELGRRGM VGGQEDMIED TAMTMARERG LTLAAA
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