| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4128 |
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| Symbol | |
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| ID | 4685217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 6104 |
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| End bp | 7399 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639825994 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_973159 |
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| Protein GI | 121582717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.871834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.173226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC CCGTCTGGAC CTGGTTGCCA GGCTCCTCAG AGCCCACCCT GGCGGGTACT
TTGGCTGCAG ATGCCGGTCG TGGACAGTTT CAGTATCACG ACGCTTACAT GGAAATGGCC
GATGCGAGGC CGCTCGACCC GATGGAGCTG AGGTTTACGC GCAGGGCTGC CGGGATTCCC
ATTCTCAGGA ATCATGGCCT TCCACGAGTG ATCATCGATG CGATGCCGGC AGGCTACGGC
GCCGATCGTC TCAATGCCAG ACATGAACGC AATCTGAGTT CCCTGGAACT GCTTGAATTG
GGCCCTCCTG ATGGCGTAGG GGCAATCGAA GTCTGCCAAG ACATCGAGCG CAAACTTCAA
TGGCGCCCCA GGCTGCTAAG CGAACTGATC GAGCACATCA ACGACCTAGA GGAGTCTGCG
CCATCGAGCC GGGCCATCCG GCGCCTCCTG GACGACGGCA TGACCAGCGC GGGCGGCGAG
CGCCCCAAAG TCACGCTGCA GCACGACGGG CGGCTGTGGC TTGCCAAGCT GCAGGACCGC
GGCGATGTTC CGCATCTTCC CGCCAGGGAA TTTGTTGTTA TGCAAATGGC TGAAGAACTC
GACATTCAGG TACCAAGGAT TTTGTTGGAG CAACACGAAG GCCGTGAGGT TTTCCTCGTC
GAGCGGTTTG ACCGCTGCGG AGATCCGGTC CAGCCGCAAC GACATCTTTT TGCCAGCGCC
CACACCGTGC TTGGACTTGA AGCGAATACC ACGCCTGGTG ACGCCAGGCG CTCATACCTT
GTGTTGGCCG AACAAATGCG TCGCTGGATT GCGGATAAGG CTGCCCTCCA AATCGATCTG
CAGGAGTTGT GGCGGCGCAT GGCCTACAAC GCCCTGGTGG GCAACGGGGA CGATCACCCG
CGCAATCATG GCCTGATCCA TGAGGGGAGG GGATGGCGCC TGTCCAAGGC CTTTGACATC
ACCCCTTTGC CGACCTTTAT CCGCGTATTG GCGCTGAGCG TTGCGCCTGA TGGTTCGCAA
GAATGCTCGG TACTCAACCT GTTGGACGCC TGCCCGCACT TTGGCTTTGA TCCGCGGGAG
GCCGCCACGT GGCTGGGCGA TGCCGCTGTT CACGTTGCAA GCCACTGGCA GCAGCGGCTG
CGAGACAACG GGGTGCCTGC TGGACATATT GGACAATTCG CGCTCGCCTT TGACCTGGCC
ACCGAACTGG CTGAGTATCC AAATCAGATC GACGAAGCGA TGGATGAAAT TGAACTGCAG
AGGCGAAAGG GTCGGCGTCG ACAACACCCC AGATGA
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| Protein sequence | MKTPVWTWLP GSSEPTLAGT LAADAGRGQF QYHDAYMEMA DARPLDPMEL RFTRRAAGIP
ILRNHGLPRV IIDAMPAGYG ADRLNARHER NLSSLELLEL GPPDGVGAIE VCQDIERKLQ
WRPRLLSELI EHINDLEESA PSSRAIRRLL DDGMTSAGGE RPKVTLQHDG RLWLAKLQDR
GDVPHLPARE FVVMQMAEEL DIQVPRILLE QHEGREVFLV ERFDRCGDPV QPQRHLFASA
HTVLGLEANT TPGDARRSYL VLAEQMRRWI ADKAALQIDL QELWRRMAYN ALVGNGDDHP
RNHGLIHEGR GWRLSKAFDI TPLPTFIRVL ALSVAPDGSQ ECSVLNLLDA CPHFGFDPRE
AATWLGDAAV HVASHWQQRL RDNGVPAGHI GQFALAFDLA TELAEYPNQI DEAMDEIELQ
RRKGRRRQHP R
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