Gene Pnap_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4127 
Symbol 
ID4685258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp3514 
End bp5871 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content48% 
IMG OID639825993 
Producthypothetical protein 
Protein accessionYP_973158 
Protein GI121582716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0546669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACATCGC TGCTTTATCA CTCCAACGGC AGCGATGCTA ATTCCTCCCC CTTTGACGAT 
GCCGTGTTGC AAGTGGCTCA AGGCAGCATC ATCAAGATCG TCAGCCCGTA CATCGGGCTG
CGCTACCTGC AACGCATCAT CGAAGCCAGC ATCGGCTGGA CGCTTGTGTC CGACATCGAG
GCTTGGCTGT CGTTTTTGTC GAGTTCCGAG CGAGCGCGGA CGCTGCCATT CATACATGCC
AATCTGGAAA AAATCCACCA CTGCTCGGCC ATTCATGCCA AAACAGTCAT CTCTCCCACG
CTGGCCTACT TGGGATCGGC CAACCTGACC ATCACGGGCA TCCTGAACCG AACCGAAATG
GGCGTGCTGC TCGAAGATCC CCGACTGGTT ACGGAACTCA ACGACTGGTT TGATGGCGTC
TGGACGCAGA CGGAGCCTCC CGACACTGCC GAGATCACCG AATTTGCCGA TTGGCTTGAC
CAGCAGGCAC TAACAGCTGC GGCTGGGCCC CCAAAGAAGT CTTTGTCATC CGCAGGCCAA
CGAGTTGCAG CTCGCCTTAC CAACCGTCCC AACCTGGGAG TCGGTCCTGT GGCAATCATC
ACCGCGAAGC CGGTCAAGCA GCAGCAGAAG GTGCCCGCGC CGGTGGCTAC TTTTGATATT
TACGATCCAG GTGTGGTGAT TTCGCTTGTG GACACGCTGG TGGTCAAGGG TTTTGGGTTT
CAAGCTTTTG TGCAGGCAGC ACATCGACAG AGCGTCAGTG TCGCGCAGCG CGATCTTTAC
TTCGCATTGC TGTTATTTTG TGCCAACCAC CCGCGTTCCA TCTTCGCAGC AGACACCTTG
AACAGACTCC TGTTCATAAA CGGTGTGTTT GTGCAGTCCA CGCCCGAGCA GTTAAAGCTG
CAGCAAAAGC CCTATGACGA GTATTTGTCG AGTCTCATCC TGGCGCTGGC CTTCGATGAA
GCCAGGCTGC TTCCAAGCAG TGCGCAGTTG CAAAAGGCGA CCGGCTTGCG AGAAGCACGC
CAGCGCCTCC TGATCAGCAG CCTGGTCGAG TCTGGATTGC TGCAGCCGCG GAAGGACACC
GGAAATTCGC CTGTGCGGTA CGCACTAAAA AGTGATTTCA TATGGTCACG CAGATTTCAG
CTTTTTTCCA AAGCCTACAA GAACTGGACG AAATGCCTCA GCCGATCGGC CGCTGACAAC
ACAGCCCTGC GCATCAGCGC CGCCAAGGAA TCGGACGATG CCCCTGCTGC AGTCCAACCC
ATCGAGTCGT GGCCTTTCGT GATAAACAAG AAAATAGCCG TAAAGCCCGA GTCACCCAGC
CATGCAATGG AAAACGATGA TGCACCGGTG CTGGCCGCCG CGCGCAGCGT AAAGCCAGAT
CCTGCCAACT TTGCGCCTCC TGAGCCTCAT TCTGAGTCAC TCCAAAGCAA GGCTATTCGA
ATAATACGAC CATCCGATCA CACGGCTTTG ATTTGGGCAA TCGAACCAAT ATTTTCATCA
GAAGCCGATC GCATCGACGA GTTGTATCTT CACCTTGCAA AAATACTTGA GCCAAGCACA
GGCTTTTTTA ACTTCAAAAG CATAAAAGCC TTTGTGATGT ATGTTTACGC TCATTATCGA
GAAGATAAAG AATTTATTGA GCAAGTATTA ATTGGGAATA TAAATAAAAC CAGGCTTTTT
TATATTACTA TAGGTTTGGA AAAAATGAAC ATATGTTGCA AGGTTGAATT AAACTTAGAT
GCAGATATGA ATGAATACCC AAAAACCTAT AAATTCATGA AAAAATCGGC AGAGGTTTTA
AAAAGGAATC TTTTAAATAA GAAAAACGGA TTAATTCTCC TTAAATACAA CCGGGGATTC
TTTGCAAGAA CGGTCGGCTA CAAGGCACTT GCTCAGTGTG ACCCCCAAAG AAAGTCTGCC
GCAATCAAAA GGGAGAATGC ACTCAGAAGA ACTGCACTTG CCAAGGAAGA TGAAGCCAAG
CAAAAGACTT TGGCAGAGAG ACAGGCATAT TTAGACGATG GTACCGTCAA GGCCATTAAA
GAGGCTTACG CCAGATTAGA CAGAGCAGAT CAAGTTTTTG AATCGCTTCT CTTTCTTGTA
CAGCTATACG GAAATCAGCT ACCTCTTGAA ACCGAAATCG AAGTATTTAA AAAAATATCA
GATAGAACAA ATATAAGAAT TAAAGAAGTC GAAAGAATAT TTAAAAATGA AACCAATCCA
TTTACTTTAT CGATATTAAA AGCAAGTGGT GATGACACTG AGACTTGTTG TTTAATTCAA
TTGAACCACT CATACTCTGG AAATTTAGAG GTCCTGCCAA GAACCAAAAA ACTTCTTGAT
ATGGCTTCGC TAAATTAA
 
Protein sequence
MTSLLYHSNG SDANSSPFDD AVLQVAQGSI IKIVSPYIGL RYLQRIIEAS IGWTLVSDIE 
AWLSFLSSSE RARTLPFIHA NLEKIHHCSA IHAKTVISPT LAYLGSANLT ITGILNRTEM
GVLLEDPRLV TELNDWFDGV WTQTEPPDTA EITEFADWLD QQALTAAAGP PKKSLSSAGQ
RVAARLTNRP NLGVGPVAII TAKPVKQQQK VPAPVATFDI YDPGVVISLV DTLVVKGFGF
QAFVQAAHRQ SVSVAQRDLY FALLLFCANH PRSIFAADTL NRLLFINGVF VQSTPEQLKL
QQKPYDEYLS SLILALAFDE ARLLPSSAQL QKATGLREAR QRLLISSLVE SGLLQPRKDT
GNSPVRYALK SDFIWSRRFQ LFSKAYKNWT KCLSRSAADN TALRISAAKE SDDAPAAVQP
IESWPFVINK KIAVKPESPS HAMENDDAPV LAAARSVKPD PANFAPPEPH SESLQSKAIR
IIRPSDHTAL IWAIEPIFSS EADRIDELYL HLAKILEPST GFFNFKSIKA FVMYVYAHYR
EDKEFIEQVL IGNINKTRLF YITIGLEKMN ICCKVELNLD ADMNEYPKTY KFMKKSAEVL
KRNLLNKKNG LILLKYNRGF FARTVGYKAL AQCDPQRKSA AIKRENALRR TALAKEDEAK
QKTLAERQAY LDDGTVKAIK EAYARLDRAD QVFESLLFLV QLYGNQLPLE TEIEVFKKIS
DRTNIRIKEV ERIFKNETNP FTLSILKASG DDTETCCLIQ LNHSYSGNLE VLPRTKKLLD
MASLN