Gene Pnap_4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4124 
Symbol 
ID4685241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp1218 
End bp1526 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content61% 
IMG OID639825990 
Producttransposase Tn3 
Protein accessionYP_973155 
Protein GI121582713 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0632177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC GTTCGATTCT TTCTGCCGCC GAGCGCGACA GCCTCCTTGC CCTGCCGGCT 
ACCCAGGATG AACTCATCCG GCACTACACG CTCAGTGAAA CCGACCTGTC AATCATTCGC
CTGCATCGCA AACCAGCGAA CCGGCTGGGT TTCGCCGTCC AGCTTTGTTA CATGCGCCAT
CCTGGCCTGG CCGGAGCCAA CGAGTGGCGT TGTTGCATAA ATCCCCGTGA TGGCGCGCCA
TCCCCCTGGC CCCCAATTTT TAGGCGATCC GGACGGAGTT CGGGCGTGCG AGCACAATCA
TGCGGTTGA
 
Protein sequence
MPRRSILSAA ERDSLLALPA TQDELIRHYT LSETDLSIIR LHRKPANRLG FAVQLCYMRH 
PGLAGANEWR CCINPRDGAP SPWPPIFRRS GRSSGVRAQS CG