Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4762 |
Symbol | ksgA |
ID | 4667215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5310804 |
End bp | 5311565 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639825954 |
Product | dimethyladenosine transferase |
Protein accession | YP_973067 |
Protein GI | 120613389 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA TTCCGCGCAA GCGCTTCGGC CAGCACTTCC TGGCCGACCA GGCCATCATC GACGCCATCG TCCGTGCCAT CGCGCCGGCG CCCGGCCAGC CGATGGTGGA GATCGGCCCG GGCCTCGCCG CGCTCACGCA GCCGCTGGTC GAGCGGCTCG GCCGCCTGAC GGTGGTGGAG CTGGACCGCG ACCTCGCCCA GCGCCTGCGC AGCCACGGGC AGCTCGACGT GATCGAGTCC GACGTGCTCA AGGTGGATTT CTCCGCGGTG GCCGCGAACC TGGGCGCGCC CCGCATCCGG ATCGTGGGCA ACCTGCCCTA CAACATCTCC ACCCCGATCC TCTTCCACCT GCTCGAGCAC GTGGGCGTCG TCGAGGACCA GCACTTCATG CTGCAGAAAG AGGTCATCGA CCGCATGGTG GCCCAACCCG CCACCAGCGA CTACGGCCGC CTTTCGGTGA TGCTGCAATG GCGCTACGCC ATGGAAGACG TGCTTTTCGT GCCGCCCGAG AGCTTCGACC CGCCCCCGCG CGTGGACAGC GCCGTCGTGC GCATGGTGCC GCACGCCGCT CCCGCGCCGG TGGCGCCCCG GCTGCTCGAG GAACTCGTGC AGGTGGCCTT CAGCCAGCGC CGCAAGCTGC TGCGCCACAC CCTGGGCCGC TGGCTCGAAG CCCGCCAGTT CACCGGCACC TTCGATACCC AGCGCCGCGC CGAGGAAGTA CCCGTGGCCG ACTACGTGGC CCTGGCGCAG GCCTGCGCCT GA
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Protein sequence | MKHIPRKRFG QHFLADQAII DAIVRAIAPA PGQPMVEIGP GLAALTQPLV ERLGRLTVVE LDRDLAQRLR SHGQLDVIES DVLKVDFSAV AANLGAPRIR IVGNLPYNIS TPILFHLLEH VGVVEDQHFM LQKEVIDRMV AQPATSDYGR LSVMLQWRYA MEDVLFVPPE SFDPPPRVDS AVVRMVPHAA PAPVAPRLLE ELVQVAFSQR RKLLRHTLGR WLEARQFTGT FDTQRRAEEV PVADYVALAQ ACA
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