Gene Aave_4762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4762 
SymbolksgA 
ID4667215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5310804 
End bp5311565 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID639825954 
Productdimethyladenosine transferase 
Protein accessionYP_973067 
Protein GI120613389 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA TTCCGCGCAA GCGCTTCGGC CAGCACTTCC TGGCCGACCA GGCCATCATC 
GACGCCATCG TCCGTGCCAT CGCGCCGGCG CCCGGCCAGC CGATGGTGGA GATCGGCCCG
GGCCTCGCCG CGCTCACGCA GCCGCTGGTC GAGCGGCTCG GCCGCCTGAC GGTGGTGGAG
CTGGACCGCG ACCTCGCCCA GCGCCTGCGC AGCCACGGGC AGCTCGACGT GATCGAGTCC
GACGTGCTCA AGGTGGATTT CTCCGCGGTG GCCGCGAACC TGGGCGCGCC CCGCATCCGG
ATCGTGGGCA ACCTGCCCTA CAACATCTCC ACCCCGATCC TCTTCCACCT GCTCGAGCAC
GTGGGCGTCG TCGAGGACCA GCACTTCATG CTGCAGAAAG AGGTCATCGA CCGCATGGTG
GCCCAACCCG CCACCAGCGA CTACGGCCGC CTTTCGGTGA TGCTGCAATG GCGCTACGCC
ATGGAAGACG TGCTTTTCGT GCCGCCCGAG AGCTTCGACC CGCCCCCGCG CGTGGACAGC
GCCGTCGTGC GCATGGTGCC GCACGCCGCT CCCGCGCCGG TGGCGCCCCG GCTGCTCGAG
GAACTCGTGC AGGTGGCCTT CAGCCAGCGC CGCAAGCTGC TGCGCCACAC CCTGGGCCGC
TGGCTCGAAG CCCGCCAGTT CACCGGCACC TTCGATACCC AGCGCCGCGC CGAGGAAGTA
CCCGTGGCCG ACTACGTGGC CCTGGCGCAG GCCTGCGCCT GA
 
Protein sequence
MKHIPRKRFG QHFLADQAII DAIVRAIAPA PGQPMVEIGP GLAALTQPLV ERLGRLTVVE 
LDRDLAQRLR SHGQLDVIES DVLKVDFSAV AANLGAPRIR IVGNLPYNIS TPILFHLLEH
VGVVEDQHFM LQKEVIDRMV AQPATSDYGR LSVMLQWRYA MEDVLFVPPE SFDPPPRVDS
AVVRMVPHAA PAPVAPRLLE ELVQVAFSQR RKLLRHTLGR WLEARQFTGT FDTQRRAEEV
PVADYVALAQ ACA