| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4754 |
|---|
| Symbol | |
|---|
| ID | 4665150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5301963 |
|---|
| End bp | 5302667 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639825946 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_973059 |
|---|
| Protein GI | 120613381 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC TGCGGATCGA GGGGCTGCAC GCCCACTACG GCAAGAGCCA CGTGCTGCAG
GGCATCGACC TGCACGTGGA CGACGGCGAA CTGGTCACGC TGCTCGGGCG CAACGGCGCG
GGCAAGACGA CCACGCTCAA GAGCATCTGC GGCGTGGTGC CGCCCACGGC GGGGCGCGTG
CGCTTCATGG GCGAGGAAGT GCAGGGCCTG CCCCCGCACC GCATCGCGCA GCGCGGTGTC
TGCCTGGTGC CCGAGCACCG CGGCATCTTC CGCCTGCTCA CGGTGGAAGA GAACCTGCTG
CTGGGCCAGC GCAGGCAGTC GCCCTGGCAG CTGGCCGACA TCTACCGCAT CTTCCCGCGC
CTGAAGGAGC GCCGCGCCAA CGGCGGCGGG CAGCTCTCGG GCGGCGAGCA GCAGATGCTG
GCCATCGGCC GCGCGCTGAT GAACGCCCCG CGCCTGCTCA TGCTCGACGA GCCCGTGGAG
GGCCTCGCGC CCGTGATCGT GGAGGAGATC GTGGCCCAGC TGCAGGCCAT CAAGGCCGCG
GGCGTGGCCA TCCTGCTCGT GGAGCAGAAC CTGGAGGTCT GCACCCAGCT GGCCGACCGC
CACTACATCA TCGAGCAGGG CGCGATCGTG CACGAGGCCC GCAACGAGGC CTTCCTGGCC
GACGAAGCGA CCAAGGACCG ATACCTGGGC GTGGGCCTCG CCTAG
|
|---|
| Protein sequence | MSILRIEGLH AHYGKSHVLQ GIDLHVDDGE LVTLLGRNGA GKTTTLKSIC GVVPPTAGRV
RFMGEEVQGL PPHRIAQRGV CLVPEHRGIF RLLTVEENLL LGQRRQSPWQ LADIYRIFPR
LKERRANGGG QLSGGEQQML AIGRALMNAP RLLMLDEPVE GLAPVIVEEI VAQLQAIKAA
GVAILLVEQN LEVCTQLADR HYIIEQGAIV HEARNEAFLA DEATKDRYLG VGLA
|
|---|
| |