Gene Aave_4750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4750 
Symbol 
ID4669837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5298049 
End bp5299254 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID639825943 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_973056 
Protein GI120613378 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GTCACCTCTT GCAACTCTCC GCGCTGGGCG CGCTGCCCGC ATCGCTCGGC 
CTCGCGCGCG GCGCCTGGGC GCAGTCCACG GGCGCGATCC AGTTCGGCTG CCCCGTGCCC
ATGTCGGGCG CCTTCGCAGC GAACGGCAAG TTCGCCGACC TGGGCATGAA GCTGGCGATC
GAGCAGTACG GCAAGGCCCT GGGCCGCCCC CTGGCCTACA CCGTGCTCGA TACCGAGGGC
AAGCCCGCCA CCGCGGTGCG CAAGGTGCAG GAGGCATCGC AGCAGCAGGG CACGCGCTTC
TTCGCGGGCG GCATCCTGTC GTCCGAATCG CTGGCCATGG GCAAGGAGGC CGAGAAGGCC
GGCGGCATCT TCATCACCAC CGCGGGTGCC GACGAGATCA CCGGCAAGGA CTGCAACGCC
GCCACGTTCC GCTGGTCGGT GCCCACCTTC GGCGCGATCG AACAGACCGT GCGCCCGCTG
GCCGACGCGC TGCCGAAGGC CAAGCGCTGG TACACCATCA CGCCGCAGTA CGTGTTCGGC
GACGGCCTGC TGTCGGCGGC CAAGAACGTC TTCAAGGAAA AGGGCCTGGA GCACGTGGGC
AACAGCTACC ACTCGCTCAC CGAGAAGGAA TTCAGCGGCT ACCTCACCAA CGCGATGGCC
GCCAGGCCCG ACGTGCTGCT GCTGCTGAAC TTCGGCTCGC AGTCGTCGGA CGCGCTGCGC
CAGGCGGTGA GCTTCGGCAT GCACAAGAAC ATGACCATCC TGATCGCCTG GGCATCGGGG
CTGGAGCAGT TCGAGTCGCT GGGCGCGGAC CTGTGCGACG GCATCTACTT CGGCGCGCAG
TACTGGCACA CCGTGGACGC CCCGCTGAAC CTGGAGCTGG TCAAGCGCAG CCAGGAGAAG
TTCAAGTCCA ACCCCAACTA CAGCCTGGCG GGCTCGTACA TCTGCACCAA GCTGCTGATC
GACGGGATCA TCAAGGCCGG CACGGCGGAC CAAAAGGCGG TGATCGCCGC GCTGGAAGGC
ATGAAGTACG CGGGCCTCAC GGGCGAGGAA GAGGTCCGCC GTGGCGACCA CCAGGTGCTC
AAGAACTACT ACCTGCTCAA GGGCAAGCCC AGGGCGAAGA TGGCCAACAA GGACGACTAC
GTGGACGTGG TGAGTTCCGG CAAGTCGTTC CTGCCGGTGG ACCAGACCGG CTGCAAGCTC
GGCTGA
 
Protein sequence
MQRRHLLQLS ALGALPASLG LARGAWAQST GAIQFGCPVP MSGAFAANGK FADLGMKLAI 
EQYGKALGRP LAYTVLDTEG KPATAVRKVQ EASQQQGTRF FAGGILSSES LAMGKEAEKA
GGIFITTAGA DEITGKDCNA ATFRWSVPTF GAIEQTVRPL ADALPKAKRW YTITPQYVFG
DGLLSAAKNV FKEKGLEHVG NSYHSLTEKE FSGYLTNAMA ARPDVLLLLN FGSQSSDALR
QAVSFGMHKN MTILIAWASG LEQFESLGAD LCDGIYFGAQ YWHTVDAPLN LELVKRSQEK
FKSNPNYSLA GSYICTKLLI DGIIKAGTAD QKAVIAALEG MKYAGLTGEE EVRRGDHQVL
KNYYLLKGKP RAKMANKDDY VDVVSSGKSF LPVDQTGCKL G