Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4750 |
Symbol | |
ID | 4669837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5298049 |
End bp | 5299254 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825943 |
Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_973056 |
Protein GI | 120613378 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTC GTCACCTCTT GCAACTCTCC GCGCTGGGCG CGCTGCCCGC ATCGCTCGGC CTCGCGCGCG GCGCCTGGGC GCAGTCCACG GGCGCGATCC AGTTCGGCTG CCCCGTGCCC ATGTCGGGCG CCTTCGCAGC GAACGGCAAG TTCGCCGACC TGGGCATGAA GCTGGCGATC GAGCAGTACG GCAAGGCCCT GGGCCGCCCC CTGGCCTACA CCGTGCTCGA TACCGAGGGC AAGCCCGCCA CCGCGGTGCG CAAGGTGCAG GAGGCATCGC AGCAGCAGGG CACGCGCTTC TTCGCGGGCG GCATCCTGTC GTCCGAATCG CTGGCCATGG GCAAGGAGGC CGAGAAGGCC GGCGGCATCT TCATCACCAC CGCGGGTGCC GACGAGATCA CCGGCAAGGA CTGCAACGCC GCCACGTTCC GCTGGTCGGT GCCCACCTTC GGCGCGATCG AACAGACCGT GCGCCCGCTG GCCGACGCGC TGCCGAAGGC CAAGCGCTGG TACACCATCA CGCCGCAGTA CGTGTTCGGC GACGGCCTGC TGTCGGCGGC CAAGAACGTC TTCAAGGAAA AGGGCCTGGA GCACGTGGGC AACAGCTACC ACTCGCTCAC CGAGAAGGAA TTCAGCGGCT ACCTCACCAA CGCGATGGCC GCCAGGCCCG ACGTGCTGCT GCTGCTGAAC TTCGGCTCGC AGTCGTCGGA CGCGCTGCGC CAGGCGGTGA GCTTCGGCAT GCACAAGAAC ATGACCATCC TGATCGCCTG GGCATCGGGG CTGGAGCAGT TCGAGTCGCT GGGCGCGGAC CTGTGCGACG GCATCTACTT CGGCGCGCAG TACTGGCACA CCGTGGACGC CCCGCTGAAC CTGGAGCTGG TCAAGCGCAG CCAGGAGAAG TTCAAGTCCA ACCCCAACTA CAGCCTGGCG GGCTCGTACA TCTGCACCAA GCTGCTGATC GACGGGATCA TCAAGGCCGG CACGGCGGAC CAAAAGGCGG TGATCGCCGC GCTGGAAGGC ATGAAGTACG CGGGCCTCAC GGGCGAGGAA GAGGTCCGCC GTGGCGACCA CCAGGTGCTC AAGAACTACT ACCTGCTCAA GGGCAAGCCC AGGGCGAAGA TGGCCAACAA GGACGACTAC GTGGACGTGG TGAGTTCCGG CAAGTCGTTC CTGCCGGTGG ACCAGACCGG CTGCAAGCTC GGCTGA
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Protein sequence | MQRRHLLQLS ALGALPASLG LARGAWAQST GAIQFGCPVP MSGAFAANGK FADLGMKLAI EQYGKALGRP LAYTVLDTEG KPATAVRKVQ EASQQQGTRF FAGGILSSES LAMGKEAEKA GGIFITTAGA DEITGKDCNA ATFRWSVPTF GAIEQTVRPL ADALPKAKRW YTITPQYVFG DGLLSAAKNV FKEKGLEHVG NSYHSLTEKE FSGYLTNAMA ARPDVLLLLN FGSQSSDALR QAVSFGMHKN MTILIAWASG LEQFESLGAD LCDGIYFGAQ YWHTVDAPLN LELVKRSQEK FKSNPNYSLA GSYICTKLLI DGIIKAGTAD QKAVIAALEG MKYAGLTGEE EVRRGDHQVL KNYYLLKGKP RAKMANKDDY VDVVSSGKSF LPVDQTGCKL G
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