| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4745 |
|---|
| Symbol | |
|---|
| ID | 4668281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5292642 |
|---|
| End bp | 5293271 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825938 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_973051 |
|---|
| Protein GI | 120613373 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CCATCCTGAC CTTCGACGGC TTCAACGACC TGGATTCGCT GGTCGCCTTC
GGCATGCTCC ACCGCATCGC GCTGCGGGGG GATGCCGATT GGCGGGTGCG CATCGCCAGC
CCGTCGCGCA GGGTGACTTC CATGAACGGG CTGACGATCG ATGCCCACGA AGGCCTGGAC
ACGCTGGCCG GGGCCGACGC GGTGCTGGTG GGCAGCGGCA TGAAGACGCG CGACGTCGCC
GCCGACCCCG CCATCATGGA GCAGTTGCGC GTGCTGGACC CCGCCCGCCA GTTGCTGGCC
GCCCAGTGCT CCGGCACCTT CCTGCTGGGC CGCCTGGGGC TGCTCGGCGG CGTGCCGGCC
TGCACCGACC TCACCAGCCG GCCCTGGGTG GAAGCCTCGG GCGTGCAGGT GGTGCAGCAG
CCGTTCGTGG CGCGCGGCAA CATTGCCACG GCGGGCGGCT GCCTCGCCTC GCAGTACCTG
GTGGCCTGGC TGCTGTGCCG GCTCAAGGGG GTGGAGGCCG CGCGCGAGGT GCTGCACTAC
TTCGCCCCCG TGGGCGAAAA ACAGGAGTAC GTGGAGCGCG CGCTGGGCCA TGTGATCCCC
CATCTGGAAC CCCAGGCCGC CATGGCCTGA
|
|---|
| Protein sequence | MRIAILTFDG FNDLDSLVAF GMLHRIALRG DADWRVRIAS PSRRVTSMNG LTIDAHEGLD
TLAGADAVLV GSGMKTRDVA ADPAIMEQLR VLDPARQLLA AQCSGTFLLG RLGLLGGVPA
CTDLTSRPWV EASGVQVVQQ PFVARGNIAT AGGCLASQYL VAWLLCRLKG VEAAREVLHY
FAPVGEKQEY VERALGHVIP HLEPQAAMA
|
|---|
| |