Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4736 |
Symbol | |
ID | 4666491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5283028 |
End bp | 5284593 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639825929 |
Product | spermidine synthase |
Protein accession | YP_973042 |
Protein GI | 120613364 |
COG category | [R] General function prediction only |
COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGCCG CCGCTCCCCT CCCATCCCCT CCGCAGCCCG CCCCCCGGCC TCTCGATATC GCGCTGCTCG CCAGCGTGTT CGTGGTGGCC GCCTGCGGCC TGCTCTATGA ACTCGTCGCG GGCGCGCTCG CCTCGTATGT GCTGGGCGAC TCGGTGCTGC AGTTCTCCAC CATCATCGGC ACCTACCTGT TCGCGATGGG CGTGGGCTCG TGGCTGTCGC GGTATTTCGA GCGCCAGCTG CCCGCGCATT TCCTGCGGAT CGAGCTGCTG GTGGCGGTGG TCGGCGGGGC GCTGCCCGCG GTGCTCTTCC TGGCCAATGC CTACGTGCCT GGTGCCTTCC GGCTGCTGCT CTACGGCATG GTGCTGCTGG TCGGCATGCT GGTGGGGCTG GAGATCCCGC TGGTGATGCG CATCCTCAAG CGCAACGTGG CGCTCAAGGA CCTGGTGTCG CAGGTGCTCA CGTTCGATTA CCTCGGCGCG CTCGCGGTGT CGCTCGCGTT CCCGCTGCTG CTGGTGCCGC ACCTGGGGCT GGTGCGCACG GGGCTGCTGT TCGGCATCTT CAACGCGGTG GTGGCGGTCT GGGCGCTGTG GCTCTTCCGG CACGAGCTGC GGCGCTTGCG GGCGCATGCG CTGGCGTGCG CGGCCGTGCT CGGGGCGCTG CTGGCCGGCT TCGCGGGGGC CGAGCACATC ACCCGCCTGG CGGAAGACCA TTTCTACCAG GACCGCATCG TCATCGCCAG CGCCTCGCCC TACCAGCGCA TCGTGGTCAC GCACGGCCGC TCGGGCTACC GGCTGTTCCT GAACGGCAAC CTGCAGTTCG CCGAGCGCGA CGAATACCGC TACCACGAGG CCCTGGTGCA CCCGGCGATG TCCGCCCACG GGGCGCCGAA ACGCGTGGCG GTGCTCGGTG GCGGCGACGG CATGGCGGTG CGCGAGATCC TCAAGTACCC CTCGGTCGAA TCGGTCACGC TGGTGGAACT CGATCCGGCC ATGACGCGGC TCTTCCGCAC CGATCCGGCG CTGGTGCGGC TCAACGCCGG AGCCCTCAAC GATCCGCGGG TGCGCATCGT CAACACGGAT GCCTTCCAGT GGCTGCAGCA GGGGGGCAGC GGGGAGTCGG CCGGTTTCGA CGTGATCGTG GTGGACTTTC CCGATCCCAC CAACTTCGCG ATCGGCAAGC TCTACACGAA CAGCTTCTAT GCGCTGCTCG AACAGCGCCT CTCGGCGAGC GGCTATGCGG TGGTGCAGAC CACCTCGCCG CTGGTGGCCC GCCAGAGTTT CTGGACCGTG GTGCAGACCG TCGAATCGGT GGGCCTGGCC ACGGCGCCGT ACCACGTGCA CGTGCCGAGC TTCGGCGAAT GGGGTTTCGT CATCGCCAGC CGGCGGCCGT GGCGCCTGCC GGAGCGCCTG CCCGGGGGGC TGCGGTTCCT GTCGGTGCCC ACGCTGCCCC TGCTGTTCGA CTTCCCCCTG GACATGGCCC GGGTGCCGGC GGAAGTGAAC CGCCTCTCGA ACCAGGTGCT GGTGCACACC TACGAGCAGG AGTGGGGCAA GGTGGCGGCG CACTGA
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Protein sequence | MTAAAPLPSP PQPAPRPLDI ALLASVFVVA ACGLLYELVA GALASYVLGD SVLQFSTIIG TYLFAMGVGS WLSRYFERQL PAHFLRIELL VAVVGGALPA VLFLANAYVP GAFRLLLYGM VLLVGMLVGL EIPLVMRILK RNVALKDLVS QVLTFDYLGA LAVSLAFPLL LVPHLGLVRT GLLFGIFNAV VAVWALWLFR HELRRLRAHA LACAAVLGAL LAGFAGAEHI TRLAEDHFYQ DRIVIASASP YQRIVVTHGR SGYRLFLNGN LQFAERDEYR YHEALVHPAM SAHGAPKRVA VLGGGDGMAV REILKYPSVE SVTLVELDPA MTRLFRTDPA LVRLNAGALN DPRVRIVNTD AFQWLQQGGS GESAGFDVIV VDFPDPTNFA IGKLYTNSFY ALLEQRLSAS GYAVVQTTSP LVARQSFWTV VQTVESVGLA TAPYHVHVPS FGEWGFVIAS RRPWRLPERL PGGLRFLSVP TLPLLFDFPL DMARVPAEVN RLSNQVLVHT YEQEWGKVAA H
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