Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4730 |
Symbol | |
ID | 4667190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5274384 |
End bp | 5276102 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639825923 |
Product | diguanylate cyclase |
Protein accession | YP_973036 |
Protein GI | 120613358 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGA ACCAATTCCT GCGCCTCATC GGCATCGTGC TGGCCACCGT GACGGCCCTG CTGGCCGCGC ATGCCAGCTG GGGGCAATGG CGCTCGTGGC GCGCGGCGGA CGCCGGATCG CGCGCGCTCG CGGACCTCGG CCTGGGCATG GTGGCGACCG AACGGGTGTC GCGCGAGCGC GGCCCGCTCG ATGGAGCGCC CGATCCGCAG GCCGTCGCCG CCCTGGCGCG GGCGCGCGAA AGCACCGACC AGGCCATGGC GCAGCTGCGC GCCATGCTCG CCGCCCGCAC GCAGGTGCCG CACCTGGACG CACTGCTGGC CGGCGCGGAC GACGCCGCGC AGGCCCTCGC CCGTGCACGG GCGGTGGCCG ACGGGGTCAT CGCCCTCCCC CACGCCCAGC GCACGCCCGA GGCCGTGCGC GCCAGCGTCT ATGGACTGGC GGCCATCGTG CCGCGGCTCG CGCCGATCAA CAGCGCACTG ATCCAGACCG TTCGGACGGC ACAGCCGTCC ATGGACGGCG ACACGCAGGT GCTGCGGATC ACCGCGGAGC TGCGCGAGCA TGCAGGCCTG CTCGGATCGC ACTTCACCGC CGCGCTGGTG ATGCAGCGTC CGTTCACGCC CGAAGAACGG CATGCGATCG AGCAGACGCG CGGGCGCATC ACGGCACTGC AGTTCCTGCT GGAGCAGCGC CTGGCCCGCC AGGATGCCCC GCCCGACATC GCCCAGGCCT GGGAGGCCGT GGACAGCGGC TACTTCGGCC ATGCGATGCG GGACATCGTC GCGCCCGTGC TGGCGGCCGG CGAGCGGGAC GGACGCTACG GCATCACCGC CGCCCAGTTC GCGGAGGGCT ACGTGCCCGA ACTGGGCAAG GTGGTGACAC TGCGCGACCG GCTGATGGCG CGGCTGCAGG CCGACGCGCT CGCCGCCCGG GAGCGCGCCC TGCACAGCCT CATGGAGGTG GCGGGCGCCT CGGCCCTGCT CTGGGCCATC CTCGCGGGCA CGCTGGCCAC GCTGCACGCC CGCGTGCTGC AGCCCCTGGC CCAGACGACC CAGGCCCTGC AGGATCTGGC CCGCAACCGC CTGGACGCCC CGCTGCCCCG GCCCGCGGCC GACGACGAGA TCGCCGCCGT GATCGGCGCC GTGCGTGCGC TGCAGGAGCA CACGCAGGCC CGGCAGGTGC TCGAGCGCGA GCGCGACGGC CTCATCGCGC AGCTGCGCGA GCAGTCGCTC ACCGATTTCC TCACGGGGCT GCCCAATCGG CGCGCGTTTT TCGCGGCGGC ACGCGAACGT ATCGCGCAGG CACGGCAGCA GCGCTTCGAC GTCGCCCTGA TGCTGCTGGA CGTGGACCTG TTCAAGAGCT TCAACGACCG CGCGGGACAC GCCGCCGGCG ACGAGGCGCT GCGGGCCGTG GCACGCGCGG TGCGCCACAC CCTGCGCCCG GGCGACCTCG TGGCGCGGTA CGGGGGCGAG GAGTTCGTGG TGCTGCTCGG CCCCTGCGCG GGCCGCGAGG GCGCGGCCTG TGCCGAGCGC CTGCGCCACG CCATCGAGAC GGCGCCGGTC GTGCTGCCGT CGGGGGAGCG CTTCCGGCTC ACGGCCAGCG TGGGCGTCGC CGTCTCCCAG CGCCACGGCA TGGTGCTGGA CCACCTGCTC TCGGAAGCGG ACACGGCCCT CTACCGGGCC AAGGACCGGG GCCGCAACCG GGTCGAGGAA GCCGCTTGA
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Protein sequence | MSLNQFLRLI GIVLATVTAL LAAHASWGQW RSWRAADAGS RALADLGLGM VATERVSRER GPLDGAPDPQ AVAALARARE STDQAMAQLR AMLAARTQVP HLDALLAGAD DAAQALARAR AVADGVIALP HAQRTPEAVR ASVYGLAAIV PRLAPINSAL IQTVRTAQPS MDGDTQVLRI TAELREHAGL LGSHFTAALV MQRPFTPEER HAIEQTRGRI TALQFLLEQR LARQDAPPDI AQAWEAVDSG YFGHAMRDIV APVLAAGERD GRYGITAAQF AEGYVPELGK VVTLRDRLMA RLQADALAAR ERALHSLMEV AGASALLWAI LAGTLATLHA RVLQPLAQTT QALQDLARNR LDAPLPRPAA DDEIAAVIGA VRALQEHTQA RQVLERERDG LIAQLREQSL TDFLTGLPNR RAFFAAARER IAQARQQRFD VALMLLDVDL FKSFNDRAGH AAGDEALRAV ARAVRHTLRP GDLVARYGGE EFVVLLGPCA GREGAACAER LRHAIETAPV VLPSGERFRL TASVGVAVSQ RHGMVLDHLL SEADTALYRA KDRGRNRVEE AA
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