| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4730 |
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| Symbol | |
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| ID | 4667190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 5274384 |
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| End bp | 5276102 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639825923 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_973036 |
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| Protein GI | 120613358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGA ACCAATTCCT GCGCCTCATC GGCATCGTGC TGGCCACCGT GACGGCCCTG
CTGGCCGCGC ATGCCAGCTG GGGGCAATGG CGCTCGTGGC GCGCGGCGGA CGCCGGATCG
CGCGCGCTCG CGGACCTCGG CCTGGGCATG GTGGCGACCG AACGGGTGTC GCGCGAGCGC
GGCCCGCTCG ATGGAGCGCC CGATCCGCAG GCCGTCGCCG CCCTGGCGCG GGCGCGCGAA
AGCACCGACC AGGCCATGGC GCAGCTGCGC GCCATGCTCG CCGCCCGCAC GCAGGTGCCG
CACCTGGACG CACTGCTGGC CGGCGCGGAC GACGCCGCGC AGGCCCTCGC CCGTGCACGG
GCGGTGGCCG ACGGGGTCAT CGCCCTCCCC CACGCCCAGC GCACGCCCGA GGCCGTGCGC
GCCAGCGTCT ATGGACTGGC GGCCATCGTG CCGCGGCTCG CGCCGATCAA CAGCGCACTG
ATCCAGACCG TTCGGACGGC ACAGCCGTCC ATGGACGGCG ACACGCAGGT GCTGCGGATC
ACCGCGGAGC TGCGCGAGCA TGCAGGCCTG CTCGGATCGC ACTTCACCGC CGCGCTGGTG
ATGCAGCGTC CGTTCACGCC CGAAGAACGG CATGCGATCG AGCAGACGCG CGGGCGCATC
ACGGCACTGC AGTTCCTGCT GGAGCAGCGC CTGGCCCGCC AGGATGCCCC GCCCGACATC
GCCCAGGCCT GGGAGGCCGT GGACAGCGGC TACTTCGGCC ATGCGATGCG GGACATCGTC
GCGCCCGTGC TGGCGGCCGG CGAGCGGGAC GGACGCTACG GCATCACCGC CGCCCAGTTC
GCGGAGGGCT ACGTGCCCGA ACTGGGCAAG GTGGTGACAC TGCGCGACCG GCTGATGGCG
CGGCTGCAGG CCGACGCGCT CGCCGCCCGG GAGCGCGCCC TGCACAGCCT CATGGAGGTG
GCGGGCGCCT CGGCCCTGCT CTGGGCCATC CTCGCGGGCA CGCTGGCCAC GCTGCACGCC
CGCGTGCTGC AGCCCCTGGC CCAGACGACC CAGGCCCTGC AGGATCTGGC CCGCAACCGC
CTGGACGCCC CGCTGCCCCG GCCCGCGGCC GACGACGAGA TCGCCGCCGT GATCGGCGCC
GTGCGTGCGC TGCAGGAGCA CACGCAGGCC CGGCAGGTGC TCGAGCGCGA GCGCGACGGC
CTCATCGCGC AGCTGCGCGA GCAGTCGCTC ACCGATTTCC TCACGGGGCT GCCCAATCGG
CGCGCGTTTT TCGCGGCGGC ACGCGAACGT ATCGCGCAGG CACGGCAGCA GCGCTTCGAC
GTCGCCCTGA TGCTGCTGGA CGTGGACCTG TTCAAGAGCT TCAACGACCG CGCGGGACAC
GCCGCCGGCG ACGAGGCGCT GCGGGCCGTG GCACGCGCGG TGCGCCACAC CCTGCGCCCG
GGCGACCTCG TGGCGCGGTA CGGGGGCGAG GAGTTCGTGG TGCTGCTCGG CCCCTGCGCG
GGCCGCGAGG GCGCGGCCTG TGCCGAGCGC CTGCGCCACG CCATCGAGAC GGCGCCGGTC
GTGCTGCCGT CGGGGGAGCG CTTCCGGCTC ACGGCCAGCG TGGGCGTCGC CGTCTCCCAG
CGCCACGGCA TGGTGCTGGA CCACCTGCTC TCGGAAGCGG ACACGGCCCT CTACCGGGCC
AAGGACCGGG GCCGCAACCG GGTCGAGGAA GCCGCTTGA
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| Protein sequence | MSLNQFLRLI GIVLATVTAL LAAHASWGQW RSWRAADAGS RALADLGLGM VATERVSRER
GPLDGAPDPQ AVAALARARE STDQAMAQLR AMLAARTQVP HLDALLAGAD DAAQALARAR
AVADGVIALP HAQRTPEAVR ASVYGLAAIV PRLAPINSAL IQTVRTAQPS MDGDTQVLRI
TAELREHAGL LGSHFTAALV MQRPFTPEER HAIEQTRGRI TALQFLLEQR LARQDAPPDI
AQAWEAVDSG YFGHAMRDIV APVLAAGERD GRYGITAAQF AEGYVPELGK VVTLRDRLMA
RLQADALAAR ERALHSLMEV AGASALLWAI LAGTLATLHA RVLQPLAQTT QALQDLARNR
LDAPLPRPAA DDEIAAVIGA VRALQEHTQA RQVLERERDG LIAQLREQSL TDFLTGLPNR
RAFFAAARER IAQARQQRFD VALMLLDVDL FKSFNDRAGH AAGDEALRAV ARAVRHTLRP
GDLVARYGGE EFVVLLGPCA GREGAACAER LRHAIETAPV VLPSGERFRL TASVGVAVSQ
RHGMVLDHLL SEADTALYRA KDRGRNRVEE AA
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