| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4724 |
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| Symbol | mnmA |
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| ID | 4666154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5268803 |
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| End bp | 5269939 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825917 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_973030 |
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| Protein GI | 120613352 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCT CCCCCAAGCA GCGCATCGTC GTCGGACTCT CCGGCGGCGT GGATTCCGCG
GTGACCGCCC ACCTCCTGAA GCAGCAGGGC CACGAAGTCG TGGGCATCTT CATGAAGAAC
TGGGAGGACG ACGACGACAG CGAGTACTGT TCCTCCAACG TCGATTTCGT CGATGCCGCG
GCCGTGGCCG ACGTGATCGG CATCGAGATC GAGCACGTCA ACTTCGCGGC CGAGTACAAG
GACCGCGTGT TCGCCGAGTT CCTGCGCGAA TACGAAGCCG GCCGCACGCC CAACCCCGAC
GTGCTCTGCA ACGCCGAGAT CAAGTTCAAG GCCTTCCTGG ACCACGCCAT GCGCGTGGGG
GCAGAAAAGA TCGCCACCGG CCACTACGCG CGCGTGCGCC ACAACCCCGC CACCGGCCTG
CACGAGTTGC TCAAGGGGCT GGACCCGGCC AAGGACCAGA GCTATTTCCT GCACCGCCTG
AACCAGTCGC AACTCTCGCG CACGCTGTTC CCCGTAGGCG AGCTGCGCAA GACCGAGGTG
CGCCGCATCG CCGAAGAGAT CGGCCTGCCC AACGCGAAGA AGAAGGACTC CACCGGCATC
TGCTTCATCG GCGAGCGGCC ATTCCGCGAG TTCCTGAACC GCTACATCCA GCACGCGCCG
GGCCCGATCC TGGATGACCG GGGACGCAGG CTGGGGCAGC ACGTGGGACT CTCGTTCTAC
ACGCTGGGCC AGCGCCAGGG CCTGGGCATC GGCGGCGTGA AGGACAAAGG CGCGCAGCGC
GGCGGCGGCG AACATGCGCC CTGGTTCGTC GCGCGCAAGG AGGTCGAACG CAACGTGTTG
CGCGTGGTGC AGGGGCACGA TCACCCCTGG CTGCTCTCGC ACACGCTGCA GGCCACCGAC
GCGAACTGGG TCGCGGGCCG GCCGCCGGCT GCCGGCGCCT GCGCGGCCAA GACGCGCTAT
CGCCAGCAGG ATGCTGCCTG CACCGTCACG CAGGCGGAGG GGGGGGATTT CGCGCTCTCA
TTTCCCGAAG CGCAGTGGGC GGTGACGCCG GGGCAGAGCG CGGTGCTGTA CGACGGCGAG
GTGTGCCTGG GAGGCGGGGT GATCACGGCG GCCGGGCCGG TGAACAGCGC GGCATAG
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| Protein sequence | MTASPKQRIV VGLSGGVDSA VTAHLLKQQG HEVVGIFMKN WEDDDDSEYC SSNVDFVDAA
AVADVIGIEI EHVNFAAEYK DRVFAEFLRE YEAGRTPNPD VLCNAEIKFK AFLDHAMRVG
AEKIATGHYA RVRHNPATGL HELLKGLDPA KDQSYFLHRL NQSQLSRTLF PVGELRKTEV
RRIAEEIGLP NAKKKDSTGI CFIGERPFRE FLNRYIQHAP GPILDDRGRR LGQHVGLSFY
TLGQRQGLGI GGVKDKGAQR GGGEHAPWFV ARKEVERNVL RVVQGHDHPW LLSHTLQATD
ANWVAGRPPA AGACAAKTRY RQQDAACTVT QAEGGDFALS FPEAQWAVTP GQSAVLYDGE
VCLGGGVITA AGPVNSAA
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