Gene Aave_4704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4704 
Symbol 
ID4665686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5248183 
End bp5250126 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content72% 
IMG OID639825900 
Producthypothetical protein 
Protein accessionYP_973013 
Protein GI120613335 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTG ACAACCGGGA ACCCTCCGTT GCCGTTAGGC ACCGGTTCCC GCACCGGCGG 
TCCACGCCGT CTCCGCCCCA CGGAAGCTCA CCCATGCACT CCAATCCCAC GGCCCCCGCC
GGGCTGCCGC CCGCCGACCC GACGCAGCCT CGCTCCCCCA CCGGACCGGC GGCCCCGGCC
TCGCCCGCCA TGGCCGCCTT CGCCGCCGCC GGCCTGCTGA CCGCATGCGG CGGGAGCAGC
GGGGGCGAGC CGGCGTCCCC CGCCGGTGCC AGCGGCACCG CTGCAGGCAC GGGGGGCGGA
ACGGCGGCCA CGGCGCCCGC CACGGAAACG GATGCCGTGC GCTTCCTGCT CCAGGCCCAG
TTCTCCGCCA CCGACGAGGA CATCGCCGCC GTGCGCGCCA AAGGCTACGC CGCCTGGCTG
GCCGAACAGT TCGCGCAGCC CATCGGCACG ACGGGCACCG ACTGGCTGGC GCAGCGCGGC
TATGGCGTGG CGAACGCGGA CACGCGCTAC CACAACACGT CCTACCCCGC CGATTACATG
CTGTGGAGCC AGCTCTTCAC CGAGCGCGAT GCCGTGCGCA AGCGCGTGGC GCTGGCGCTC
TCGGAGATCA TGGTCGTCTC CACCAATGGA CTGAACCAGC CGTGGCCCGC GTTCCTCGCC
GCCGGCTACT GGGACGTGCT CAACCAGCAT GCGCTCGGCA ATTTCCGCGC GCTGCTGGAG
GCCGTGACGC TCAACCCCGC CATGGGCGTG TACCTCAACG CCCTGGGCAG CCAGAAGGAG
GATGCGCGCA CCGGCCGCCA GCCCGACGAG AACTATGCCC GCGAGGTGAT GCAGCTCTTC
ACACTGGGCC TGTACCGGCT GAACGCCGAC GGCACCGAGC AGCGCGACGC GAGCGGCAAC
CGCATCGAGA CCTACGGCCC CTCCGACGTG AGCAACCTCG CGCGGGTGTT CACCGGCTAC
GACTACGACC GCAGCCAGAA CCAGTCGTTC ACCGTGGGCA CCAGCACCGT GCCGGGGCCC
CAGCAGGCGG GGCGGCCGAT GGTGCTGGTC GCCAGCCGGC ACTCGGCGCT GGCCGCGACG
TTCCTGGGTA CGACCATCGG AGCGGGCACC CCGGGCGATG CGGCCCTGAA GACCGCGCTG
GATACGCTTT TCAACCACCC CAACGTCGCC CCGTTCATCG GCCGGCAGCT CATCCAGCGG
CTGGTGACGA GCAACCCCAG CCCCGCCTAC GTGGCGCGGG TGGCGGCCGC CTTCTCGGAC
AACGGCAGCG GGGTGCGCGG CGACCTGCGC GCCGTGGTGG CAGCGATCCT GCTCGACAGC
GAGGCCCGGG ATGCCGCAGG CCTGTCCAGC CCCTCCTTCG GCCGACTGCG CGAGCCCATG
GTGCGCTTCG TCCAGTGGGG CCGCACCTTC GGCCTGCGGT CGGCCCGCGG CAGCTGGAAG
CTCGGCGACC TGAGCGACCC GGCCTCCCGG CTGGGGCAGA GCCCGCTGCG CTCGCCTTCG
GTGTTCAATT TCTTCCGCCC CGGCTACGTG CCGCCCTCCA CGGCCATCGC GTCCGCCGGG
CAGGTGGCGC CGGAGTTCCA GATCGTCACC GAGTCCAGCG TGGGCGGCTA CCTGAACTTC
ATGCAGAACG CGATCCGCAA CGGCCTGTTC GTGAACGCTC CCGACCTGCC GCAGAACAAC
GCGAGCAACG GCAACAACGG CTTCGACATC ACCTGCGACT ATGCCGCCCT GCTCCCGCTG
GTGACCGATC CGGCCGCACT GGTGCGCAAG GCGGCGCTGC TGCTGTCGGG GGGCCAGATC
TCCGATGCCA CGCAGGCGCG CATCGCCAAT GCGCTGGCAG CCACGCCGGT CACGGCCTCG
AGCAGCGCGG CGGCCAAGCT CAACCGCGTG GCCGCAGCCG TCTTCCTGGT CATGGCCTGC
CCGGCCTATC TCGTGCAGAA GTGA
 
Protein sequence
MHADNREPSV AVRHRFPHRR STPSPPHGSS PMHSNPTAPA GLPPADPTQP RSPTGPAAPA 
SPAMAAFAAA GLLTACGGSS GGEPASPAGA SGTAAGTGGG TAATAPATET DAVRFLLQAQ
FSATDEDIAA VRAKGYAAWL AEQFAQPIGT TGTDWLAQRG YGVANADTRY HNTSYPADYM
LWSQLFTERD AVRKRVALAL SEIMVVSTNG LNQPWPAFLA AGYWDVLNQH ALGNFRALLE
AVTLNPAMGV YLNALGSQKE DARTGRQPDE NYAREVMQLF TLGLYRLNAD GTEQRDASGN
RIETYGPSDV SNLARVFTGY DYDRSQNQSF TVGTSTVPGP QQAGRPMVLV ASRHSALAAT
FLGTTIGAGT PGDAALKTAL DTLFNHPNVA PFIGRQLIQR LVTSNPSPAY VARVAAAFSD
NGSGVRGDLR AVVAAILLDS EARDAAGLSS PSFGRLREPM VRFVQWGRTF GLRSARGSWK
LGDLSDPASR LGQSPLRSPS VFNFFRPGYV PPSTAIASAG QVAPEFQIVT ESSVGGYLNF
MQNAIRNGLF VNAPDLPQNN ASNGNNGFDI TCDYAALLPL VTDPAALVRK AALLLSGGQI
SDATQARIAN ALAATPVTAS SSAAAKLNRV AAAVFLVMAC PAYLVQK