| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4691 |
|---|
| Symbol | |
|---|
| ID | 4669852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5234758 |
|---|
| End bp | 5235624 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639825887 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_973000 |
|---|
| Protein GI | 120613322 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG CGGAGGACGC ATCCGCTGGC GAACCGGCCG GCACCGTGCC GCGTTCGGCG
GGGGAGATGG TGCGGCATCC GTTTTTCCGC ACCGGCATGA CGGACATGAT CGGCACCAGC
GTGGGCATCG GCGCCTGGGG ACTGGTGACC GGGGTGGCGA TGGTCAAGAG CGGCATGCCC
GTGGGGCTGG CGATCTTCAT GTCGCTCACC GTCTATGCGG GCAGCGCCCA GCTCACCGTG
CTGCCGTTGC TCGCCGCAGG GGCGCCGCTG TGGGTGATGT GGCTCGCGGC CTGCTGCGTG
AACCTGCGCT TCGTCATCTT CAGCAGCATG TGGCGCAGCT ATTTCGCCTG GCTGCCGCGC
CGCCAGCGGC TGGCGGTGGG GTATTTCAGC GGCGACGTGA TCTTCGTCGC CTTCATGAAG
CGCTTTCCGC GGCCCGCGCC GCAGGCCGAG CAGGTGCCCT ACTTCTGGGG CGCGGCAGTG
CTGAACTGGC TGTCGTGGCA GGTGCCGTCC ATCGCCGGGA TCCTGCTGGC GAACGTGGTG
CCGCTGTCCT GGGGACTGGG CTTCGCGGGC GTGCTGGCGC TGCTGGGCGT GCTGCTGTCC
ATGCTCTTCG ACCGCGCCAC CTGGATCGCC ACGGGCGTGG CGATGACGGC GGCGATCGCC
GCGTTCTCGC TGCCGCTCAA GCTCAACATC CTGGTCGCGA TCGCGGCCGC CGTGGCCGCC
GGGCTGCTGA TCGAGGCGGC GGACCGCCAC CTGCGGCGCA GGCCCGAGGT GCGGCTCGTG
CCTGCGCACG GCACGTTGCG GCCGGACGAG AAAAAGCACG TGCAGGACGG GGACGTGGTG
CCGCTGCGCG AGGAGGACCA CCCATGA
|
|---|
| Protein sequence | MSMAEDASAG EPAGTVPRSA GEMVRHPFFR TGMTDMIGTS VGIGAWGLVT GVAMVKSGMP
VGLAIFMSLT VYAGSAQLTV LPLLAAGAPL WVMWLAACCV NLRFVIFSSM WRSYFAWLPR
RQRLAVGYFS GDVIFVAFMK RFPRPAPQAE QVPYFWGAAV LNWLSWQVPS IAGILLANVV
PLSWGLGFAG VLALLGVLLS MLFDRATWIA TGVAMTAAIA AFSLPLKLNI LVAIAAAVAA
GLLIEAADRH LRRRPEVRLV PAHGTLRPDE KKHVQDGDVV PLREEDHP
|
|---|
| |