| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4687 |
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| Symbol | |
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| ID | 4669779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5231287 |
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| End bp | 5232540 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825883 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_972996 |
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| Protein GI | 120613318 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCTG ACAAGAGCAA GAGCAACGGG ATCCAGAACA TGAATGCATC CACCCGCCTG
CGGGCACCGG CCCTGGGCGC GCTCACGCTT GCCGCCGCGG CCATCGCGGT CCCGCTGGCC
GGGCATGCGC AGAACTATCC CGTCACGGCC GGGCAGCGCG CCACGGCCCA GCAGGTGGCC
TCGCGCGGAG TGCCGCTCGC CGAGCTGGCG CCCAACGCGC CCGACACCTA CGTCGTCAAG
CGCGGCGACA CGCTCTGGGG CATCTCGGGC ATGTACCTGC TGCGCCCCTG GCGCTGGCCC
GAACTCTGGG GCATGAACCT GCAGTCCATC CCCAATCCGC ACCTGATCTT CCCGGGCCAG
ACCCTCTACC TCGAGAAGGT GGACGGCTAT GCGCGCCTGC GCACCGCCCG CGGCGGCACG
GACGGCGACC CGGAAACCGT CCGCATCTCC CCCCGCACCC GCACGGACAG CCTCGCCGGC
ACGGCGCTGC CCACGCTGCC CCCGCACCTC ATCGAGCCCT TCCTGGTCGA ACCGCTGGTC
GTGGACGAGC TGACCCTGTC CCAGACCCCG CGCATCGTGG CCACGGTGGA CGAGCGCGTG
CTCATGGCCA ACGGCGACCG CGCCTATGCG CGCGGCCCGG CCGGGCGGCC CCTGCGCCTC
GACCCGGGCG TGCCGCGCCA CTACCGCGTG TTCCGCAACG CCGTCCCGAT GAAGGACCCC
GAAACCGGCG AAATCCTGGG CTACGAGGCC CAGTACGTCG CCCGGGCGGA CCTGGTGCGC
GGCGAAGCCA CGGAAGAGAC CCGCACGCCC GACGGCGGTG CCCGGACCGA TCCCGTGCCC
GCCACCATCG ACCTCTCTGG CGCGAAGGAA GAGATCCGTT TCGGCGACCG CCTGCTGCCC
GCCCCGGAGC GCGGCTACAC GAGCTACACG CCGCAGGCGC CCCAGTTCCC GGTGGATGCG
CGCGTGGTGT CCATCTACGG CAGCGCCGCC GTCGCCTACG CGGCGCAGAA CCAGGTGGTC
GCGATCAACC GCGGCACCCG TGACGGCATG CAGCCGGGCC TCGTGCTGAC CGTGCTCACC
AAGGGCGAGC GCATCCTGGA CAAGACCGAT CCGGACCGCG GCACCATCAA GCTGCCCAGC
GAGGCCAATG GCACGGCCAT GGTCTTCCGC ACCTTCGACC GCGTCTCCTA TGCGCTCCTG
CTGCAGATGC GCCAGGGCGT GCGCGTGGGC GACCGTCTCG TGAATCCGCA GTAG
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| Protein sequence | MCADKSKSNG IQNMNASTRL RAPALGALTL AAAAIAVPLA GHAQNYPVTA GQRATAQQVA
SRGVPLAELA PNAPDTYVVK RGDTLWGISG MYLLRPWRWP ELWGMNLQSI PNPHLIFPGQ
TLYLEKVDGY ARLRTARGGT DGDPETVRIS PRTRTDSLAG TALPTLPPHL IEPFLVEPLV
VDELTLSQTP RIVATVDERV LMANGDRAYA RGPAGRPLRL DPGVPRHYRV FRNAVPMKDP
ETGEILGYEA QYVARADLVR GEATEETRTP DGGARTDPVP ATIDLSGAKE EIRFGDRLLP
APERGYTSYT PQAPQFPVDA RVVSIYGSAA VAYAAQNQVV AINRGTRDGM QPGLVLTVLT
KGERILDKTD PDRGTIKLPS EANGTAMVFR TFDRVSYALL LQMRQGVRVG DRLVNPQ
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