| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4605 |
|---|
| Symbol | |
|---|
| ID | 4665642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 5123727 |
|---|
| End bp | 5124776 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639825803 |
|---|
| Product | pirin domain-containing protein |
|---|
| Protein accession | YP_972916 |
|---|
| Protein GI | 120613238 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.738915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC CGTCCCCCCT GCTCGGCAGC CAGCCCCTGG GCCCCCTCTG GCCCACGCTG
GACCCGTTCC TTTTCTGCGC CCACCACGAC GATGCCTATC CGCGCGGCAA TGGCCGCCTG
GGGCCCGATG CGCCGCTCAC GGGCCGGCAG ATCGGGCAGG ATTTCTCGCG CAAGGACGGC
TGGAGCATGT ACCACGGCGA CGAGGTGCCC GGCTTCCCGC CCCATCCGCA CCGCGGTTTC
GAGACCGTGA CCATCGTGCG CACCGGCCTC ATCGACCATG CCGACTCGCT GGGCGCCGCC
GCCCGGTTCG GGCAGGGCGA CGTGCAGTGG CTGACCGCGG GCCAGGGCAT CGTGCATTCC
GAAATGTTCC CGCTGCTGGA CGTGCAGCGG CCCAACCCGC TCGAGCTGTT CCAGATCTGG
CTCAACCTGC CCGCGGCGGA CAAGATGGTG CCGCCGCACT TCACCATGTT CTGGGCCGGT
GACATCCCGC GCCTGGTGTC CACCGACGAT GCCGGGCACC GCACCGAACT GACCGTGATC
GCCGGGCGGG TGCCCGGTGC GGGCGCACAG CCGCTCGCAC CGCCCCCGCA CTCCTGGGCG
GCGCGCGATG CCTCGGACGT GGCGATCTGG ACGCTGCGGC TCGCGCCCGG CGCGCGTTAC
ACCCTGCCCG CCGCGGCGGG AGAGGGCACG CGGCGCATGC TCTACCACTT CGCGGGCGAG
GGCGTGCGCG TGGCCGGCGA GGCCGTGGGC CATGCCGCGC TGGAGCTGCG CGCGGGCGCC
GCGGTGGAAC TGGTGAACGG CAGCGCTGAA CAGGCCGCCG AGTTCCTGCT GCTCCAGGGG
CGCCCCCTGG GCGAGCCGGT GGTGCAGTAC GGCCCCTTCG TGATGAACTC CGAGGCACAG
ATCCACCAGG CGCTGGCGGA CTACCGCCGC ACGCAGTTCG GCGGCTGGCC CTGGGGCGAC
GGCGCGCCCG TGCACGGCCC GCAGCCGCGC CGCTTCGCGC GGCGGCCCGG CGAAGCCGCC
GACGAAGTGC CCGAGGCGAT CGCGACCTGA
|
|---|
| Protein sequence | MSTPSPLLGS QPLGPLWPTL DPFLFCAHHD DAYPRGNGRL GPDAPLTGRQ IGQDFSRKDG
WSMYHGDEVP GFPPHPHRGF ETVTIVRTGL IDHADSLGAA ARFGQGDVQW LTAGQGIVHS
EMFPLLDVQR PNPLELFQIW LNLPAADKMV PPHFTMFWAG DIPRLVSTDD AGHRTELTVI
AGRVPGAGAQ PLAPPPHSWA ARDASDVAIW TLRLAPGARY TLPAAAGEGT RRMLYHFAGE
GVRVAGEAVG HAALELRAGA AVELVNGSAE QAAEFLLLQG RPLGEPVVQY GPFVMNSEAQ
IHQALADYRR TQFGGWPWGD GAPVHGPQPR RFARRPGEAA DEVPEAIAT
|
|---|
| |