Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4603 |
Symbol | |
ID | 4666296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5122169 |
End bp | 5123143 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825801 |
Product | spore coat U domain-containing protein |
Protein accession | YP_972914 |
Protein GI | 120613236 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.348761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCGCG CAGCACGTCC GGCACGGAGG GCGCCGGGGG CCGCCCTGCC GCTGGCGGCA GCGGGGCTGC TGGCGGCCCT CTGCCGCACG GCATCGGCCG ATTGCGTGAA CAGCGAAACC GGCGGCAATC TCGGCACGGT GCCCTCGCAG CGGGTGCTCT CCGGCCCCGC CGTCACCACC ACGGCGCAGT TCACGCTGGG GTGCGGGGGC ATCGTGCTGT CCACGCTGGG CACGTCGACG GTGCAGGCGA AATTCTTGAG CCCCACGACC GGGCTCACGC TCAAGGACGG AACGAAGCCG GCCATTCCCT ACCAGATCAC CAACCTCGCG GGCGCCAGCT ACACGCAGGG CGCGCTGGTG ATCAATGCCA GCGGCGCGAA CGTGATCGCG CTGCTGAGCA ACAACACCGC GTCGCTGCCG CTGCGCGTCA CCACCGCGGT CGGCGCGAAC GTGCCCGCGG GCACCTACAC GGACACCATC ACCGTGAACT GGGCCTACGC CAACATCTGC GAAGGCCTGC TCGGCGTGGG TGGCATCTGC GTGGGCACGC CGCGCAATGG CAACGTGAAC CGACTGCTGA CCGTGCGGCT GGTGGTCACG AACGACTGCA CCCTGTCCGC GCCGAACCTG CAGTTCGGCT CCGCGCCCCT GCCGGCGGCT TTCCCGGCGG TGTCCGGCAA CATCTCGGTG GTCTGCACGC GCGGATTGTC CGTGACCGTG GGGCTCGGCC CGGGCGCCTA TCCCTCGGGC GGCCGCAGGC AGATGGCCAG CGGCGCGAAC CGGCTGGCCT ACGACCTGTT CCGGGCCGAC GGCAGCCTCT GGGGCACGGC CGCGGGCACG CGCACGGCCG GAACGGCCGT CACGGACGGC ACCGCGCCCA TCGTTCTGCC CTACACGGCG CGCATCTACG GCGACCAGAC ACCGCCGCCG CCCGGGGTGT ACCAGGACAA CGTGGTGGTG GACGTGCAGT ACTGA
|
Protein sequence | MTRAARPARR APGAALPLAA AGLLAALCRT ASADCVNSET GGNLGTVPSQ RVLSGPAVTT TAQFTLGCGG IVLSTLGTST VQAKFLSPTT GLTLKDGTKP AIPYQITNLA GASYTQGALV INASGANVIA LLSNNTASLP LRVTTAVGAN VPAGTYTDTI TVNWAYANIC EGLLGVGGIC VGTPRNGNVN RLLTVRLVVT NDCTLSAPNL QFGSAPLPAA FPAVSGNISV VCTRGLSVTV GLGPGAYPSG GRRQMASGAN RLAYDLFRAD GSLWGTAAGT RTAGTAVTDG TAPIVLPYTA RIYGDQTPPP PGVYQDNVVV DVQY
|
| |