| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4590 |
|---|
| Symbol | |
|---|
| ID | 4666278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5109381 |
|---|
| End bp | 5110337 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639825788 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_972901 |
|---|
| Protein GI | 120613223 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CCCTCTACGA CCTCGACGTG CTGCGCACCT TCACCACCGG CGTGGCACTC
GGAAGCTTCG TGCGCGCCGC GGACAGGCTG GGGCGCTCCA CTTCGGCGGT GAGCGCGCAA
TTGAAGAAGC TGGAATCGCA GGCGGGCACG CCCCTGCTGC GCAAGTCCGG CCGCGGCCTG
GTGCTCACCG AGGCCGGCGA AATCCTGCTG GCCTATGCCC GCCGCCTGCT CGACCTGAAC
GACGAAGCCG CCGCCGCCGT GAGCGGCAGC CCGCTGCACG GGCTGGTCCG CCTGGGCCTG
CAGGAAGATC TGGGTGAGAC GCTGCTGCCC GGGGTGCTGG GGCGTTTCGC GCGGGCGCAT
CCGCAGGTGC GTATCGAGGT CTGCGCGGCC CGCAGCACCG AACTGCGCGA GCGGTTCGCC
GTGGGCCAGC TGGACCTGGC ACTGCTTTGG GATGCGGGCA TCGATCTGTC GTGCATGCGG
GCCGAGCGGA TCATTCGCCA GCCCCTGCAC TGGATCGGCC CGGCCGGCGC GGACACGCTG
GACGAAGCCC CCTGGTGGCA GGGCCGGCAT GCGCTCACGC CATCGAGCCG GCCGCCGCTG
CCGCTGGTGC TGCTCGAAGA CCCCTGCCCC CTGCGGCGCA TCGTCACGAC CGCGCTGGAT
CACGCGGGCC TGCCCTGGCG CCACGCCTTC CACAGCAGCA GCCTGGGCGC GATGTGGGCG
GCGACGGCGG CGGGGCTGGG GCTTTCCGTG CGCACGTCCT TCGGCCTTCC GGCGCACGTC
AGGCCCCTGT CGGCCTCGGC CTGCGGACTG CCCGAGCTCC CGTCCATGGA GCTGGTGCTG
GGACGCGCCC GGGACCCGCT GGATGCCGCC TCGGAGCGGC TGGCCGCGTT GCTGCTGGAT
GCCGTGCGGG AGCACATGGG CTTTTCCGGC AAGGGCGGCA TCGTGCCGGC CGCCTGA
|
|---|
| Protein sequence | MARTLYDLDV LRTFTTGVAL GSFVRAADRL GRSTSAVSAQ LKKLESQAGT PLLRKSGRGL
VLTEAGEILL AYARRLLDLN DEAAAAVSGS PLHGLVRLGL QEDLGETLLP GVLGRFARAH
PQVRIEVCAA RSTELRERFA VGQLDLALLW DAGIDLSCMR AERIIRQPLH WIGPAGADTL
DEAPWWQGRH ALTPSSRPPL PLVLLEDPCP LRRIVTTALD HAGLPWRHAF HSSSLGAMWA
ATAAGLGLSV RTSFGLPAHV RPLSASACGL PELPSMELVL GRARDPLDAA SERLAALLLD
AVREHMGFSG KGGIVPAA
|
|---|
| |