Gene Aave_4589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4589 
Symbol 
ID4666504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5107987 
End bp5109282 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID639825787 
Productmajor facilitator superfamily transporter 
Protein accessionYP_972900 
Protein GI120613222 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT GCACTTCGAT GTCCGCGGCC TGTGCCGCAC GGCCTCCCGT CCCCGGTACC 
TCCCGTTCCC GCCACCGCTG GAAAGTGCTG GCGGCCGGGG TGTGCGCCAA CGCGGCGTTT
TCCGTCGCCT TCAGCGGCAT CCCCATGACC GCCGTGATGA TGCGCAGCAG CTACCAGCTC
GATGCCGCCG TCCTCGGGCT GATGCTGGGC CTCATGGGGC TGGGCATCGC CGTGAGCGAA
ATGCCGTGGG GCATGCTCAC CGACCGCTGG GGCGACCGGC CCGTGCTGCT GGCAGGGCTG
GCAGGCACCG CGCTGGCCCT GGCAGCCATG GCCTTCTGGG CCGTGCCGTC GGCCGGGCAT
GTGCCGGCGC GGGGGCTGCT CGCGGGCGGA CTGGTGCTGG TCGGCCTGCT GGGGGGCAGC
GTCAATGGCG CCAGCGGCCG GGCCATCATG CAATGGTTCG CCGAGGGCGA GCGGGGCCTG
GCCATGAGCA TCCGCCAGAC ATCCGTACCG CTCGGCGGCG CGATCGGCGC GCTGCTGCTG
CCCGCGCTGG CATTGCACGG CGGTTTCGCC GCCGTGTACG GGGTGCTGGC GGCGCTGTCC
CTGCTGGCGG CCCTCATGGC GGCTGCCTGG GTGCGCGAGC CCGGGCAGGT GGCACATGGC
GTTGCCGCCG CGCCCGCCAT GGACCCGGGA GGGCCGCTGC GCGATGCACG TGCCTGGCGC
CTGGCCGCGG GCATCGGCCT GTCATGCGCG CCGCAGTTCG CGGTGCTGTC GTTCGGTACC
GTGTTCCTGC ACGACTTCGT GCGAGCCGGG CTGGAGGCCA CCACCGCGAC CATGGCGGCC
GTTCAGGTCG GCGCCATGGC GCTGCGCGTG TGGAGCGGGC GCTGGACCGA CCGTCGCCGC
AATCGGCCTG CCTATCTGCG GGCCTGCTGC GCACTCGCTG CCCTGCTGTT CGCCGCCATG
GCGGTGCTGG CCGGATGGAG CGCGGAGGGA TCGGCACGGA GCATGCAAGG GGTGCTGCTG
GCGTTGCTGG CGGCCTGCGG ACTGTGCGTG TCGGCCTGGC ACGGCGTGGC GTACACGGAA
CTGGTGGTGC GGGTGGGCGC CGGCCGCGCG GGCACGGCGC TGGGCATGGC CAACACCAGC
GTATTCATCG TGTGCTTCCT GGTGCCGTTG CTCATCCCCC ATTTGCTGGC TCCCTGGGGC
TGGGGGGCGG TCTGGGGCGC CGCGGCGGCC TGCACGCTGG CGGGACGGTG GCTGATGGTG
CCTCGGGTGC CGGCCGACGC TCCACGCAGT CCGTAG
 
Protein sequence
MTTCTSMSAA CAARPPVPGT SRSRHRWKVL AAGVCANAAF SVAFSGIPMT AVMMRSSYQL 
DAAVLGLMLG LMGLGIAVSE MPWGMLTDRW GDRPVLLAGL AGTALALAAM AFWAVPSAGH
VPARGLLAGG LVLVGLLGGS VNGASGRAIM QWFAEGERGL AMSIRQTSVP LGGAIGALLL
PALALHGGFA AVYGVLAALS LLAALMAAAW VREPGQVAHG VAAAPAMDPG GPLRDARAWR
LAAGIGLSCA PQFAVLSFGT VFLHDFVRAG LEATTATMAA VQVGAMALRV WSGRWTDRRR
NRPAYLRACC ALAALLFAAM AVLAGWSAEG SARSMQGVLL ALLAACGLCV SAWHGVAYTE
LVVRVGAGRA GTALGMANTS VFIVCFLVPL LIPHLLAPWG WGAVWGAAAA CTLAGRWLMV
PRVPADAPRS P