Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4589 |
Symbol | |
ID | 4666504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5107987 |
End bp | 5109282 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639825787 |
Product | major facilitator superfamily transporter |
Protein accession | YP_972900 |
Protein GI | 120613222 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCT GCACTTCGAT GTCCGCGGCC TGTGCCGCAC GGCCTCCCGT CCCCGGTACC TCCCGTTCCC GCCACCGCTG GAAAGTGCTG GCGGCCGGGG TGTGCGCCAA CGCGGCGTTT TCCGTCGCCT TCAGCGGCAT CCCCATGACC GCCGTGATGA TGCGCAGCAG CTACCAGCTC GATGCCGCCG TCCTCGGGCT GATGCTGGGC CTCATGGGGC TGGGCATCGC CGTGAGCGAA ATGCCGTGGG GCATGCTCAC CGACCGCTGG GGCGACCGGC CCGTGCTGCT GGCAGGGCTG GCAGGCACCG CGCTGGCCCT GGCAGCCATG GCCTTCTGGG CCGTGCCGTC GGCCGGGCAT GTGCCGGCGC GGGGGCTGCT CGCGGGCGGA CTGGTGCTGG TCGGCCTGCT GGGGGGCAGC GTCAATGGCG CCAGCGGCCG GGCCATCATG CAATGGTTCG CCGAGGGCGA GCGGGGCCTG GCCATGAGCA TCCGCCAGAC ATCCGTACCG CTCGGCGGCG CGATCGGCGC GCTGCTGCTG CCCGCGCTGG CATTGCACGG CGGTTTCGCC GCCGTGTACG GGGTGCTGGC GGCGCTGTCC CTGCTGGCGG CCCTCATGGC GGCTGCCTGG GTGCGCGAGC CCGGGCAGGT GGCACATGGC GTTGCCGCCG CGCCCGCCAT GGACCCGGGA GGGCCGCTGC GCGATGCACG TGCCTGGCGC CTGGCCGCGG GCATCGGCCT GTCATGCGCG CCGCAGTTCG CGGTGCTGTC GTTCGGTACC GTGTTCCTGC ACGACTTCGT GCGAGCCGGG CTGGAGGCCA CCACCGCGAC CATGGCGGCC GTTCAGGTCG GCGCCATGGC GCTGCGCGTG TGGAGCGGGC GCTGGACCGA CCGTCGCCGC AATCGGCCTG CCTATCTGCG GGCCTGCTGC GCACTCGCTG CCCTGCTGTT CGCCGCCATG GCGGTGCTGG CCGGATGGAG CGCGGAGGGA TCGGCACGGA GCATGCAAGG GGTGCTGCTG GCGTTGCTGG CGGCCTGCGG ACTGTGCGTG TCGGCCTGGC ACGGCGTGGC GTACACGGAA CTGGTGGTGC GGGTGGGCGC CGGCCGCGCG GGCACGGCGC TGGGCATGGC CAACACCAGC GTATTCATCG TGTGCTTCCT GGTGCCGTTG CTCATCCCCC ATTTGCTGGC TCCCTGGGGC TGGGGGGCGG TCTGGGGCGC CGCGGCGGCC TGCACGCTGG CGGGACGGTG GCTGATGGTG CCTCGGGTGC CGGCCGACGC TCCACGCAGT CCGTAG
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Protein sequence | MTTCTSMSAA CAARPPVPGT SRSRHRWKVL AAGVCANAAF SVAFSGIPMT AVMMRSSYQL DAAVLGLMLG LMGLGIAVSE MPWGMLTDRW GDRPVLLAGL AGTALALAAM AFWAVPSAGH VPARGLLAGG LVLVGLLGGS VNGASGRAIM QWFAEGERGL AMSIRQTSVP LGGAIGALLL PALALHGGFA AVYGVLAALS LLAALMAAAW VREPGQVAHG VAAAPAMDPG GPLRDARAWR LAAGIGLSCA PQFAVLSFGT VFLHDFVRAG LEATTATMAA VQVGAMALRV WSGRWTDRRR NRPAYLRACC ALAALLFAAM AVLAGWSAEG SARSMQGVLL ALLAACGLCV SAWHGVAYTE LVVRVGAGRA GTALGMANTS VFIVCFLVPL LIPHLLAPWG WGAVWGAAAA CTLAGRWLMV PRVPADAPRS P
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