| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4557 |
|---|
| Symbol | |
|---|
| ID | 4667999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 5075366 |
|---|
| End bp | 5075836 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639825755 |
|---|
| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_972868 |
|---|
| Protein GI | 120613190 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC TAGCTTCCAT ATTGCCGGCC GCTCAAGTGC TCGTGAGCGT CGATGCCACC
AGCAAAAAGC GTGCTTTCGA GGAGGCGGGT CTGTTGTTCG AGAGCGAGCA TGGCCTCTCT
CGCGCGCTCA TCACCGACAG CCTCTTCGCC CGCGAGCGCC TGGGATCGAC CGGCCTGGGC
CACGGCGTTG CGATTCCCCA CGGACGCATC AAGGGACTCA AGGCGCCCAT GGCGGCCGTT
TTCCAACTGG CGCATCCCAT CGGCTTCGAC GCACCCGACG AGCAGCCCGT GGGCCTGCTC
ATCTTCCTGC TCGTGCCGGA AGCCGCCACG CAGAAGCACC TGGAAATCCT TTCGGAAATC
GCCGAGCTGC TGAGCGACGG CCCGCTGCGC GAGCGCATCA AGTCCTCCAC CGACGCGGCC
GAACTCCACG GCCTCATCGC TGGCTGGCAG TCCGCCCAGG CTGCCGCGTG A
|
|---|
| Protein sequence | MNRLASILPA AQVLVSVDAT SKKRAFEEAG LLFESEHGLS RALITDSLFA RERLGSTGLG
HGVAIPHGRI KGLKAPMAAV FQLAHPIGFD APDEQPVGLL IFLLVPEAAT QKHLEILSEI
AELLSDGPLR ERIKSSTDAA ELHGLIAGWQ SAQAAA
|
|---|
| |