| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4555 |
|---|
| Symbol | |
|---|
| ID | 4667994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5073921 |
|---|
| End bp | 5074358 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639825753 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_972866 |
|---|
| Protein GI | 120613188 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA TCGACGAACT CAAGAGCACC GGGCTCAAGG CCACCCTGCC CCGCCTGAAG
ATCCTCGAGA TCTTCCAGAA AGGCGCACAA CGCCACATGA CGGCCGAAGA CGTGTTCCGT
GTGCTGCTGG ACGAACGTTC CGACATCGGC CTGGCCACCG TCTATCGCGT GCTCACCCAG
TTCGAGCAGG CGGGCATCCT GATCCGCAGC AACTTCGAGA GCGGCAAGGC GGTGTACGAG
CTCAACGAGG GCCAGCACCA CGACCACTTC ATCTGCATGG TCTGCGGCAA GGTCGAGGAG
TTCTTCGACC CCGAGATCGA GAAGCGCCAG CAGCTCGTGG CCAAGGCCAA GGGATGGGTG
GTGCAGGACC ACTCGATGGC CCTCTACGGC CAATGCGCCA GCTGCGCCGC GAAAGCCTCT
TCCGGCAACG GCCGCTGA
|
|---|
| Protein sequence | MTNIDELKST GLKATLPRLK ILEIFQKGAQ RHMTAEDVFR VLLDERSDIG LATVYRVLTQ
FEQAGILIRS NFESGKAVYE LNEGQHHDHF ICMVCGKVEE FFDPEIEKRQ QLVAKAKGWV
VQDHSMALYG QCASCAAKAS SGNGR
|
|---|
| |