Gene Aave_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4549 
Symbol 
ID4668029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5068797 
End bp5069492 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID639825747 
Productputative phage repressor 
Protein accessionYP_972860 
Protein GI120613182 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC GTCGGATTCA GGAGCAGCGG CGGGCACGGC TCGCCGATGC CGTGCGTCGT 
CTGTCCGAGG GCAATGTGGC GGCCTTCGGC CGCCTGCTGG GCTACCGCGG CGGCGCATTC
GTGCGGCAGA TGCTCTGCGG CAACCGTGCC GTGTCGGACA AGACGGTGCG CCACATCGAG
TCCATGCGCG GCATGCATGC CTGGTTCTCG CAGCCGCCGG CGCCGGCTGG CACCCGGGAA
TCCTCCGCCG CGTACGACTT CGACGCAGGG CCTGAGATGT ACGAGCTCTT CCCGGTCTCC
CTGCATTTGC GGCCCGGCAT CGCGGATTAC GCGATCTGGC CCGACGAGAC CGACGAGGAT
GCTCCCATCA CCTTCCACCG CCAATGGCTG GAGCGGCGCG GCTACATTCC CCAGTGCCTG
CTGGCCATCC GCGTGCGCGG CTGCGGCATG GAGCCGTCCA TCCAGGCAGG CGACATCGTG
GTCGTGAACA CATCCGACAC CACGCTGCGC GACGGGCAGG TCTTCGCCAT CAACGGCTTC
GGCGAAGTGC TGCTGCGGCG CGCCCAGCGC GACGACGGGC GCTGGTGGAT CTCCTGCGAC
AACCCCGACC AGGCCCGCTA TCCACGCAAG GCCTGGGCCG AGCCGGACTG CATCCCCATC
GGCCGGCTGG TGTTCAAGCA GAGCGAGTGC ATCTGA
 
Protein sequence
MDERRIQEQR RARLADAVRR LSEGNVAAFG RLLGYRGGAF VRQMLCGNRA VSDKTVRHIE 
SMRGMHAWFS QPPAPAGTRE SSAAYDFDAG PEMYELFPVS LHLRPGIADY AIWPDETDED
APITFHRQWL ERRGYIPQCL LAIRVRGCGM EPSIQAGDIV VVNTSDTTLR DGQVFAINGF
GEVLLRRAQR DDGRWWISCD NPDQARYPRK AWAEPDCIPI GRLVFKQSEC I