| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4546 |
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| Symbol | holA |
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| ID | 4668051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5064331 |
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| End bp | 5065377 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639825744 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_972857 |
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| Protein GI | 120613179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG CGCTGAACCA GTTGGTCGCC CACCTCCAGA AGGGGGTACG CCCGCTCTAC
ACGCTCCATG GCGATGAGCC GCTGCTGCAA CAGGAGGCCG CGGATGCCAT CCGCGCCGCC
GCGCGCGGGC AGGGCTACAC CGAGCGCAGC AGCCACACCG TGGCCGGTGC GCACTTCGAC
TGGAGCGCGG TACTGGCGGC GGGCGGTTCG CTATCGCTTT TCGCGGACAA GCAGATCGTG
GAAATCCGCA TTCCCTCGGG CAAGCCGGGC AAGGACGGCG GCGCGGCCCT GCAGCAGATC
GCCACGGCCG CCGCAGGCAA CGAAGGCACG CTGACGCTCG TCGTGCTGCC GCGCCTGGAC
AAGGCCACGC GCACCGGCGC CTGGTTCTCG GCCCTGGACC GCGAGGGCGT GAGCGTGCAG
ATCGACCCGG TGGAGCGCGT CGCCCTGCCG CAGTGGATCG CGCAGCGCCT GGCGGCGCAG
GGCCAGCGCG TGGCCGCGGG GGAAGAAGGC CAGCGCACGC TCCAGTTCTT CGCAGACCGG
GTGGAGGGCA ACCTGCTGGC CGCACACCAG GAAGTCCAGA AGCTCGCCCT GCTGCATCCG
CCTGGCGAAC TCTCCTGGGC GCAGGTCGAA GCCGCCGTGC TCAATGTGGC ACGCTACGAC
GTCTTCAAGC TTTCCGAGGC CGTGCTGTCC GGCCAGGTGG CGCGCATGCA GCGCATGCTC
GACGGCCTGC AGGCCGAAGG CGAGGCCGAG GTACTGGTCC ACTGGGCCCT CGCCGAAGAC
ATCCGGTCCC TGAAGCGCGT GAAGGATGCG GTGAATGCCG GCAAGCCCCT GCCCATGGCC
CTGCGCGAAA ACCGCGTCTG GGGGACGAAA GAGCGGCTCT TCGAGCGCAT CGTGCCCCGT
TTTTCCGATG CCGCCGCATC GCGCCTGCTG CAGTCCGCCC ACATCGTGGA CGGCATCGTG
AAGGGGCTCA AGGTGCCCGA CTGGCCCGCC GATGGCTGGC AGGCACTGCA CCGCCTGGCG
CTGCAGCTGT GCAAGGCAGT GAAGTGA
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| Protein sequence | MQIALNQLVA HLQKGVRPLY TLHGDEPLLQ QEAADAIRAA ARGQGYTERS SHTVAGAHFD
WSAVLAAGGS LSLFADKQIV EIRIPSGKPG KDGGAALQQI ATAAAGNEGT LTLVVLPRLD
KATRTGAWFS ALDREGVSVQ IDPVERVALP QWIAQRLAAQ GQRVAAGEEG QRTLQFFADR
VEGNLLAAHQ EVQKLALLHP PGELSWAQVE AAVLNVARYD VFKLSEAVLS GQVARMQRML
DGLQAEGEAE VLVHWALAED IRSLKRVKDA VNAGKPLPMA LRENRVWGTK ERLFERIVPR
FSDAAASRLL QSAHIVDGIV KGLKVPDWPA DGWQALHRLA LQLCKAVK
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