Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4537 |
Symbol | secE |
ID | 4669245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5045803 |
End bp | 5046189 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639825726 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_972848 |
Protein GI | 120613170 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0688027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGT CTCAGCAAAT TGAAACCGTA AGTACAGGCG CGGACAAGGC CAAGCTGGCC GCTGTCGTCG CGTTGCTGAT TGCGGGTATT GCCGGTTTCT ACCTTCTGTC CAAGCAGGGG CCCCTGGTCC AGTGGGCTAT TCTGATCGTC GCGGTCATCG CCGCCGCAGC CGTCTTCGCG GTGTCCGAGT CGGGCCGCCG CTTCACCGGC TTCGCCAAGG ATGCCTGGAA AGAGGTCAAG AAGGTCGTGT GGCCCACCCG CAAGGAAACC TTGCAGATGA CGGCCTACGT GTTTGCCTTC GTGCTGGTAA TGGCGCTGTT CCTTTGGTTC ACCGATAAAA CGCTGGAATG GGTGCTCTAC GATCTGATTC TGGGCTGGAG GAAATAA
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Protein sequence | MAASQQIETV STGADKAKLA AVVALLIAGI AGFYLLSKQG PLVQWAILIV AVIAAAAVFA VSESGRRFTG FAKDAWKEVK KVVWPTRKET LQMTAYVFAF VLVMALFLWF TDKTLEWVLY DLILGWRK
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