| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4521 |
|---|
| Symbol | |
|---|
| ID | 4668571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 5021580 |
|---|
| End bp | 5022566 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639825709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972832 |
|---|
| Protein GI | 120613154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACT GGTGGGTCAA TCAAAACCAA ACATATCGTC ATGAGGTGCG GGGCGGGTAT
CTTTGGTCGC CCAAGCGCAA GGCCAACCAA GCAAGGAACC CGTTTTATGA CTTCATGCGC
GAGGTGGCTC CTGGCGATGT GGTCTTCTCA TTTGCGGACA CCGTGATTCG AGCCATCGGC
ATCGCGCAAT CGCATGCGTA CGAGGCCCCG AAGCCGTTGG AGTTTGGACA GACCGGGGCC
TACTGGGATC GGATCGGCTG GCGCTTGGAT GTGCATTTCC ATCCCCTTCG GGCGCCTGTG
CGGCCCGCCT CCCACATGGC GGTGCTGGCA CCACTGCTAC CGGAGCGATA CGCCCCTTTG
CGGCCCAACG GAGTGGGGTT GCAGAGCGTG TACCTGACGC GCCTTCCTGA GCGTCTGGCG
GCGGCCTTGA TCGATCTGCT GGGTGCTGAA GCCCATGATT TGGTGAAAGG CTTCCGTGTC
GCAGACAGAT CCGAAATAGT CGGCTCTGCG GTGGGGCTTG TTGAATGGGA AGAGCACGAG
CTTCAACGGG TCCAAACCGA CGCCAGCTTG CCCGAAACAG ACCGCCAGGC GTTGGTGCTG
GCGCGCAGAG GCCAAGGCGC CTTTAAGAGG CATGTCATGG CTATAGAGCG AGCCTGCCGG
ATCACGGGTG TGACAAGGGA AGAGCACCTC CGCGCCAGTC ACTGCAAACC CTGGCGAGAT
GCCACGAACG AAGAGCGGCT CGATGGTGAA AATGGTCTGC TGCTTACCCC AAGCATGGAT
CATCTGTTCG ACCGTGGGTT CATTGCGTTC GACGACGATG GGCAGGTGAT TTTTTCTCCT
GTGGCGGACC AGGATTCGCT GGTCCGCATG GGGCTTGATC CCCGGCAGCC TTGGAATGTC
GGTGCCTTTT CAAGCGGGCA GAAGCGCTTC CTCGAATTCC ATCGCGAGAA TGTGTTGCTG
CGCTCCAGCT TTTTGGAGCA TCTATGA
|
|---|
| Protein sequence | MRYWWVNQNQ TYRHEVRGGY LWSPKRKANQ ARNPFYDFMR EVAPGDVVFS FADTVIRAIG
IAQSHAYEAP KPLEFGQTGA YWDRIGWRLD VHFHPLRAPV RPASHMAVLA PLLPERYAPL
RPNGVGLQSV YLTRLPERLA AALIDLLGAE AHDLVKGFRV ADRSEIVGSA VGLVEWEEHE
LQRVQTDASL PETDRQALVL ARRGQGAFKR HVMAIERACR ITGVTREEHL RASHCKPWRD
ATNEERLDGE NGLLLTPSMD HLFDRGFIAF DDDGQVIFSP VADQDSLVRM GLDPRQPWNV
GAFSSGQKRF LEFHRENVLL RSSFLEHL
|
|---|
| |