| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4497 |
|---|
| Symbol | |
|---|
| ID | 4668418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4995289 |
|---|
| End bp | 4997223 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639825685 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_972808 |
|---|
| Protein GI | 120613130 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.170703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGA CGGAGGCCGC CCTCCCTTCG GGCGGCGGGC ACGAGAGCCA TCCCAACCAG
TTCGCGCTGC TGCGCCAGCG GCGGTTCGCT CCGTTTTTCT GGACGCAGTT CGCGGGGGCG
GCGAACGACA ACCTCTTCAA GTTCGCCTTC ACCGTGATGG TGACCTACCA ACTGAGCGTG
TCGTGGATGC CGCCGTCCAT GGCGGGGCTG GTGATCGGCG CGCTCTTCAT CCTGCCGTTC
CTGCTGTTTT CCGCCACGTC GGGCCAACTG ACGGACAAGA TCGACAAGAC GCGCATGATC
CGCGTCGTGA AGAACCTGGA GATCGCCATC ATGCTGGTGG CGGCCTGGGG CTTCCTGGCA
GCCAGCCCCG TGGTGCTGCT GGGCTGCACC TTCCTCATGG GTCTGCACTC CACGCTGTTC
GGCCCGGTGA AGTTCGCCTA CCTGCCGCAG GTGCTGTCCG AGCGCGAGCT CACGGGCGGC
AACGGCATGG TGGAGATGGG CACCTTCGTC GCCATCCTGC TGGGGCAGGT CGCCGGCGGG
CTGCTGGTGG CCGTGCCCGG CGTGGGCCAT GCCTGGGTGG CGGCCGCCTG CGTGCTCGTC
GCGCTCGCGG GGCGGGCAAC GGCGCAGTTC ATTCCGAGCG CGCCGGCCAC CGATCCGGGC
CTTGTCATCA ACTGGAACCC GGTCAGCGAG ACCTGGCGCA ACCTGAAGCT GGCGCACGGC
AATCCGGTGG TGTTCCGCTC CCTGCTGGGC ATCAGTTGGA TGTGGTTCTT CGGGGCGGTG
TTCCTCTCGC AGTTCCCCAG CTTCGCCAAG GAGGTGCTGC ACGGCGACGA GCACGTGGCC
TCTCTGCTGC TGGTCGTGTT CTCCGTGGGC ATCGGCATCG GTTCGCTGCT GTGCGAGGTG
CTCTCGCGCC GGCAGGTGGA GGTCGGCCTC GTGCCCCTGG GCGCCATCGG CATGAGCGTG
TTCGCCATCG ACCTGTACTT CGCCTCGCGC GGCCTGCCGG CGGTGCCCGC GATGGGCCTG
GGCGCGTTCC TGGCGCAGCC CGCGCACTGG CGCGTGATGG CCGATCTGCT GCTGCTGTCG
CTGTTCGCCG GCCTCTACAG CGTGCCGATG TACGCACTCA TCCAGATGCG CAGCCAGGCC
ACGCACCGCG CGCGCATCAT CGCGGCCAAC AACATCCTCA ACGCGCTCTT CATGATCGCC
AGCTCGGTGA TCGCCGGGGC GCTGCTGTCG GCCGGCTGGA GCGTGCCGCA GGTGTTCCTC
TTCACCGGCA TCGCCAATGC CCTGGTGGCC GGCTACATCT TCCTGATCGT GCCGGAATAC
CTGCTGCGCT TCGTGGCCTG GGTGCTGTCG CGGCTGGTGT ACCGCTTCCG CGTGCGGGGC
GACGCGCACA TCCCCGCGCA GGGCGCGGCG GTGCTGGTCT GCAACCACGT GAGCTTCGTC
GATGCCGTGC TGCTCATGGC CGCGAGCCCC CGCCCGATCT ATTTCGTGAT GGACCACCGC
ATCTTCCGCG TGCCCGTGCT GGGCTGGCTG TTCCGGCTCG CCAAGGCGAT CCCCATCGCT
CCCCAGAAGG AGGACGCCGC CATTTACGAG GCCGCCTTCG AGCGCGCGGC GCAGGTGCTG
CGGGGTGGCG ACCTGCTGGC CATCTTCCCG GAGGGCGGCA TCACCCGCGA CGGTCAGCTG
CAGCCCTTCA AGGGCGGGAT CATGAAGATC CTGGAGCGCG CGGCGGCCGA AGGCGTGCGG
CCTCCGGTGG TGCCGATGGC GCTCAGCAAC CTCTGGGGCT CGTTCTTCAG CCGGGTGGAC
GGCACCGCCA TGGCGCGCCC GTTCCGCCGC GGCCTGTTCA ACCGCGTGAA GCTGGACGTG
GGAGCACCCG TGCCGGCGGA GGCGGTGCAG CCCGAACTGC TGCGGGCGCG CGTGGCGCAA
TTGCTGGACC GGTGA
|
|---|
| Protein sequence | MAATEAALPS GGGHESHPNQ FALLRQRRFA PFFWTQFAGA ANDNLFKFAF TVMVTYQLSV
SWMPPSMAGL VIGALFILPF LLFSATSGQL TDKIDKTRMI RVVKNLEIAI MLVAAWGFLA
ASPVVLLGCT FLMGLHSTLF GPVKFAYLPQ VLSERELTGG NGMVEMGTFV AILLGQVAGG
LLVAVPGVGH AWVAAACVLV ALAGRATAQF IPSAPATDPG LVINWNPVSE TWRNLKLAHG
NPVVFRSLLG ISWMWFFGAV FLSQFPSFAK EVLHGDEHVA SLLLVVFSVG IGIGSLLCEV
LSRRQVEVGL VPLGAIGMSV FAIDLYFASR GLPAVPAMGL GAFLAQPAHW RVMADLLLLS
LFAGLYSVPM YALIQMRSQA THRARIIAAN NILNALFMIA SSVIAGALLS AGWSVPQVFL
FTGIANALVA GYIFLIVPEY LLRFVAWVLS RLVYRFRVRG DAHIPAQGAA VLVCNHVSFV
DAVLLMAASP RPIYFVMDHR IFRVPVLGWL FRLAKAIPIA PQKEDAAIYE AAFERAAQVL
RGGDLLAIFP EGGITRDGQL QPFKGGIMKI LERAAAEGVR PPVVPMALSN LWGSFFSRVD
GTAMARPFRR GLFNRVKLDV GAPVPAEAVQ PELLRARVAQ LLDR
|
|---|
| |