| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4483 |
|---|
| Symbol | |
|---|
| ID | 4667990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4981976 |
|---|
| End bp | 4982659 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639825672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972795 |
|---|
| Protein GI | 120613117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.106264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT TGAGCAATAT TTTTTGGATC ATTGGTACGT TGTCAATAAG TTCAAATGCT
ATTGCTGCGG GCATTGATGG CGTTGTGCCC GGCGCTATTT ACAAATCTAA AGCTGAGGCC
TTGATCGCCT CGGACCTTGA TCTCTATGCA ACGCCTGAAA ATCAAAAGAT TATAGAATCA
ACTTCCAAGA AACTGGAAAA ACTGAAAGCC AATCTAGGAA ATAGCTTTGG AGGGAGCTGG
ATAGAATATG ATGGAAATAA ACGTGCACGA CTTGTAGTTG GCGTTACTTC CAGCCAAATA
GGGGCAAAAG CGATCGAGAA TTTGTCCTCG GACCCCGACA TAGAAATTGT CGGGGTGAAA
AATAGCTACG CAGCGTTAGA AGCGATGCGG AAGAAGATTT TTTCCCACTT CGAAAACCTA
GCGAGAGGCT CTCAATCTGT CATTTTCATC ATAGCGTTGG ACGACGAAGG GAACAGATTG
CTAGTTAGGG GTAGTTCGAA TAATCTTCCA TTTATTAAGA AAGAATTGCT GTCGGCGGGT
TTTGATCTGG ACGCAATCAA ACTGGAAGAA CAGAATGGCC CCATGAGTTT TATGGGAGTC
GTACTCGGTG GAACAAGGAT CGGTTCTTCA TCAAGCGCAG ATCCTACGGC CCCATGTACC
GCTGTACTAC AGGCTTTAAT GTAA
|
|---|
| Protein sequence | MLRLSNIFWI IGTLSISSNA IAAGIDGVVP GAIYKSKAEA LIASDLDLYA TPENQKIIES
TSKKLEKLKA NLGNSFGGSW IEYDGNKRAR LVVGVTSSQI GAKAIENLSS DPDIEIVGVK
NSYAALEAMR KKIFSHFENL ARGSQSVIFI IALDDEGNRL LVRGSSNNLP FIKKELLSAG
FDLDAIKLEE QNGPMSFMGV VLGGTRIGSS SSADPTAPCT AVLQALM
|
|---|
| |