| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4479 |
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| Symbol | tgt |
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| ID | 4668000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4979008 |
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| End bp | 4980180 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825669 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_972792 |
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| Protein GI | 120613114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0710937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAAT TCGAACTTCT CGCGACCGAT CCCGCCAGCC ACGCGCGGCG CGGCACGCTC
ACGCTCAACC ACGGGGTGGT GCAGACCCCC ATCTTCATGC CGGTGGGCAC CTACGGCACC
GTCAAGGGCG TGATGCCGCG CAGCCTGCAC GAGATGGGCG CGCAGATCAT CCTGAGCAAC
ACCTTCCACC TGTGGATGCG ACCGGGCCTG GACGTGATGC AGAGCTTCGG CGGCCTGCAC
GGCTTCGAGC AGTGGAACAA GCCCATCCTC ACCGACTCGG GCGGCTTCCA GGTCTGGTCG
CTGGGCGCCA TGCGCAAGAT CACCGAGGAG GGGGTGCACT TCGCGAGCCC GGTGAACGGC
GACAAGCTCT TCATGTCGCC CGAGGTGAGC ATGCAGATCC AGACGGTGCT CAACTCCGAC
ATCGTCATGC AGCTCGACGA ATGCACGCCC TACGAGACCA AGGGCCACAA GACCACGGAG
GCCGAGGCGC GCAAGTCGAT GGAGATGAGC CTGCGCTGGG CGCGCCGCAG CCAGGACGAG
TTCCACCGCC TGGGCAACCC CAACGCGCTC TTCGGCATCG TGCAGGGCGG CATGTACAAG
AACCTGCGCC AGGAATCGCT GGAGCGGCTG GTGGAGATGG ATTTCCCGGG CTACGCCGTG
GGCGGCGTGA GCGTGGGCGA GCCCAAGGAC GAGATGCTGG ACATCATGGC CCACACGCCG
CACCGGCTGC CGGCCCACAA GCCGCGCTAC CTGATGGGCG TGGGCACGCC GGAAGACCTC
GTGCAGGGCG TGGCCGACGG CGTGGACATG TTCGACTGCG TGATGCCCAC GCGCAATGCG
CGCAACGGCA CCATCTTCAC CCGCTTCGGC GACCTGAAGA TCCGCAACGC ACGCCACAAG
GCCGACCACC AGCCGCTGGA CCCGACCTGC ACCTGCCACG CCTGCGCGGG CACCGAGGGC
GTGGCCTGGG CCGACGGCGG CCGCGGGGGG TTCAGCCGCG CGTACCTGCA CCACCTCGAC
CGCTGCGGCG AGATGCTGGG CCCCATGCTC ACCACGGTGC ACAACCTGCA CTACTACCTG
AACCTCATGC GGGAGATCCG CGAGTCGCTC GACGCGGGCC GCTTCGGCGA GTTCCGCGCC
CGCTTCGCTG CCGACCGCGC GCAGGGCGTG TAG
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| Protein sequence | MLQFELLATD PASHARRGTL TLNHGVVQTP IFMPVGTYGT VKGVMPRSLH EMGAQIILSN
TFHLWMRPGL DVMQSFGGLH GFEQWNKPIL TDSGGFQVWS LGAMRKITEE GVHFASPVNG
DKLFMSPEVS MQIQTVLNSD IVMQLDECTP YETKGHKTTE AEARKSMEMS LRWARRSQDE
FHRLGNPNAL FGIVQGGMYK NLRQESLERL VEMDFPGYAV GGVSVGEPKD EMLDIMAHTP
HRLPAHKPRY LMGVGTPEDL VQGVADGVDM FDCVMPTRNA RNGTIFTRFG DLKIRNARHK
ADHQPLDPTC TCHACAGTEG VAWADGGRGG FSRAYLHHLD RCGEMLGPML TTVHNLHYYL
NLMREIRESL DAGRFGEFRA RFAADRAQGV
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