| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4474 |
|---|
| Symbol | |
|---|
| ID | 4668017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4972860 |
|---|
| End bp | 4973825 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639825664 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_972787 |
|---|
| Protein GI | 120613109 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.572232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0637795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTCCG TGCTGGCCGT CACCTTTCCC TTCTTCGCGC TCGTGCTGTG CGGGTACCTG
GCCACGCGCG CCGGCCGGCT GCCGCTGGCG GCCATCCCGG GGCTGAACGC CTTCGTGCTG
TTCTTCGCGC TGCCGTGCAT GCTGTTGCGC TTCGGCGCGC GCACGCCCAT TGCCGAGCTG
CTGGATCCCG CGGCGGCGGG TGTGTATCTG GCCTGCGGCC TGGCGCTGGT GGCCGCGGCC
ATCGCGCTCA CGCACCGCCG GCTGGGCTGG AACGATGCGG CGTTCGGCGC GCTGGCGACG
GCGTTCCCGA ACACCGGCTT CATGGGCGTG CCGCTGCTCG TGGCGCTGCT CGGGCCGGCC
GCCGCGGGGC CGGTCATCCT CACGATGCTG CTGGACATGG TGGTGACCAC GGCGGTCTGC
GTCGGCCTGT CGCGCCTGGG CGGAGGGGGC GAGCCGGGCG CCGAAGGCGC GCGGGCGGCA
CTGGGGCGGG CCCTGCGCGG CATCGCTGCC AATCCCATGC CCTGGTCGAT CGCGCTGGGC
GCGCTGGCTT CCGGGCTGCA GGTGGCCCTG CCGGGGCCCG TGGAACGCAC CGTGGGGCTG
CTGGCGGATG CGGCGGCGCC CGTGGCGCTG TTCACCATCG GCGCGGTGCT GGCGCGAGCG
GCCATGGCCG CGCATCCCGA AGAGGCCCTG CGCCCCCGGG ACGGCCTGGG CGCGGCGCTG
GCCAAGCTGG TGGCGCATCC GGTGCTCGTC TGGGGCGTGG GCCATGCGGC GATCGCCGCG
GGCGCGCCGC TGTCCGCGCC GGCGCACACC GCGCTGATCC TCGCGGCGGC GCTGCCGAGC
GCCAGCAACG TCTCGCTGCT GGCAGAGCGC TTCGGCGCGC ACACGGGGCG CATCGCCCGG
GTGATCCTGG TGTCCACCGT GCTGGCTTTC CTGAGCTTTT CTGCGGCGGT GGCCCTCTGG
GCCTGA
|
|---|
| Protein sequence | MLSVLAVTFP FFALVLCGYL ATRAGRLPLA AIPGLNAFVL FFALPCMLLR FGARTPIAEL
LDPAAAGVYL ACGLALVAAA IALTHRRLGW NDAAFGALAT AFPNTGFMGV PLLVALLGPA
AAGPVILTML LDMVVTTAVC VGLSRLGGGG EPGAEGARAA LGRALRGIAA NPMPWSIALG
ALASGLQVAL PGPVERTVGL LADAAAPVAL FTIGAVLARA AMAAHPEEAL RPRDGLGAAL
AKLVAHPVLV WGVGHAAIAA GAPLSAPAHT ALILAAALPS ASNVSLLAER FGAHTGRIAR
VILVSTVLAF LSFSAAVALW A
|
|---|
| |