Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4457 |
Symbol | |
ID | 4666338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4955394 |
End bp | 4956023 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639825648 |
Product | TetR family transcriptional regulator |
Protein accession | YP_972771 |
Protein GI | 120613093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.108103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGT CTGCAGCCAC CTCCCGATTG CGCCCCGGCG GGCGCAGCGC CCGCGTGCAG GCCGCCGTGC ACCAGGCCGT GCGCGACCTG ACGGCGCTGC ACGGCCGCGA TGCGCTCACC ATCCCGCAGA TCGCGGCGCG GGCGGGCGTC ACGCCGTCCA CCATCTACCG CCGCTGGGGT GATCTGGTCG AACTGCTGGC GGACGTGTCG ATCGAGCGCC TGCGCGACGA GGCCGACCCG CCGGACACCG GCAGCGTGCG CGGCGACCTG CTGGCCTGGG GCGAGCAGTT CCTGGAGGAG ATGTCGTCCG AACTGGGCCG CCAGGTGCTG AAGGACGTGC TCACCGCCAG CGGCTATGGC GACGGCTCGG CGCCCTGCCA GTGCCTGCAG ATCACCGCGG GGCAGATCAC CATGCTGGTC GGGCGTGCGC GCTCGCGCGG GCAGGCGACG CCTTCGGTGG ACTGCGTGCT GGACACGCTG GTGGCGCCCA TCATCTACCG CCTGCTGATG GGGGCGGGCA CGCCCACGGC GCAGCAGGTG GTGCAGTGGG TGGATGCGTG CATGGCGCAG GGGGGCCGGG CGGAAGCGGC GCCGTGCGGC GCGCATGCCG TCGAGGCGGC AGCCCCGTAG
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Protein sequence | MTTSAATSRL RPGGRSARVQ AAVHQAVRDL TALHGRDALT IPQIAARAGV TPSTIYRRWG DLVELLADVS IERLRDEADP PDTGSVRGDL LAWGEQFLEE MSSELGRQVL KDVLTASGYG DGSAPCQCLQ ITAGQITMLV GRARSRGQAT PSVDCVLDTL VAPIIYRLLM GAGTPTAQQV VQWVDACMAQ GGRAEAAPCG AHAVEAAAP
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